Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.45□□□□□ -1.86
PDGFRAP16234 UBE2D3P2-201ENST00000424409 445 ntBASIC3.45□□□□□ -1.86
PDGFRAP16234 AC005326.1-201ENST00000429197 123 ntBASIC3.45□□□□□ -1.86
PDGFRAP16234 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.45□□□□□ -1.86
PDGFRAP16234 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.45□□□□□ -1.86
PDGFRAP16234 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.45□□□□□ -1.86
PDGFRAP16234 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.45□□□□□ -1.86
PDGFRAP16234 MTCO1P27-201ENST00000448269 226 ntBASIC3.45□□□□□ -1.86
PDGFRAP16234 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.45□□□□□ -1.86
PDGFRAP16234 PAXBP1P1-201ENST00000449315 447 ntBASIC3.45□□□□□ -1.86
PDGFRAP16234 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.45□□□□□ -1.86
PDGFRAP16234 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.45□□□□□ -1.86
PDGFRAP16234 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.45□□□□□ -1.86
PDGFRAP16234 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.45□□□□□ -1.86
PDGFRAP16234 RPL30P9-201ENST00000465586 330 ntBASIC3.45□□□□□ -1.86
PDGFRAP16234 RPS23P3-201ENST00000470993 430 ntBASIC3.45□□□□□ -1.86
PDGFRAP16234 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.45□□□□□ -1.86
PDGFRAP16234 AC017015.1-201ENST00000477387 286 ntBASIC3.45□□□□□ -1.86
PDGFRAP16234 RPL32P34-201ENST00000486380 400 ntBASIC3.45□□□□□ -1.86
PDGFRAP16234 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.45□□□□□ -1.86
PDGFRAP16234 AC147055.4-201ENST00000504399 745 ntBASIC3.45□□□□□ -1.86
PDGFRAP16234 AC021678.1-201ENST00000505195 936 ntBASIC3.45□□□□□ -1.86
PDGFRAP16234 CBX3P3-201ENST00000508108 532 ntBASIC3.45□□□□□ -1.86
PDGFRAP16234 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
PDGFRAP16234 SNORD59.2-201ENST00000516873 68 ntBASIC3.45□□□□□ -1.86
PDGFRAP16234 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.45□□□□□ -1.86
PDGFRAP16234 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.45□□□□□ -1.86
PDGFRAP16234 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.45□□□□□ -1.86
PDGFRAP16234 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.45□□□□□ -1.86
PDGFRAP16234 AL031985.2-201ENST00000600955 480 ntBASIC3.45□□□□□ -1.86
PDGFRAP16234 AC022022.2-201ENST00000602989 360 ntBASIC3.45□□□□□ -1.86
PDGFRAP16234 MIR6130-201ENST00000619419 109 ntBASIC3.45□□□□□ -1.86
PDGFRAP16234 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.45□□□□□ -1.86
PDGFRAP16234 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.45□□□□□ -1.86
PDGFRAP16234 AC092447.10-201ENST00000620607 1652 ntBASIC3.45□□□□□ -1.86
PDGFRAP16234 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
PDGFRAP16234 AC087359.1-201ENST00000508335 1740 ntBASIC3.44□□□□□ -1.86
PDGFRAP16234 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.44□□□□□ -1.86
PDGFRAP16234 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PDGFRAP16234 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
PDGFRAP16234 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
PDGFRAP16234 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
PDGFRAP16234 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
PDGFRAP16234 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.44□□□□□ -1.86
PDGFRAP16234 RNU6-1207P-201ENST00000384343 107 ntBASIC3.44□□□□□ -1.86
PDGFRAP16234 SNORA11.1-201ENST00000408133 129 ntBASIC3.44□□□□□ -1.86
PDGFRAP16234 RNA5SP31-201ENST00000411144 127 ntBASIC3.44□□□□□ -1.86
PDGFRAP16234 HIGD1AP15-201ENST00000416198 280 ntBASIC3.44□□□□□ -1.86
PDGFRAP16234 MTATP6P4-201ENST00000427725 675 ntBASIC3.44□□□□□ -1.86
PDGFRAP16234 AC024082.2-201ENST00000434771 238 ntBASIC3.44□□□□□ -1.86
PDGFRAP16234 CST9LP2-201ENST00000437612 320 ntBASIC3.44□□□□□ -1.86
PDGFRAP16234 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.44□□□□□ -1.86
PDGFRAP16234 AC006539.3-201ENST00000454258 129 ntBASIC3.44□□□□□ -1.86
PDGFRAP16234 BX510359.1-201ENST00000456973 237 ntBASIC3.44□□□□□ -1.86
PDGFRAP16234 AC010468.1-201ENST00000461022 817 ntBASIC3.44□□□□□ -1.86
PDGFRAP16234 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
PDGFRAP16234 AP002884.2-201ENST00000471647 395 ntBASIC3.44□□□□□ -1.86
PDGFRAP16234 MTND2P14-201ENST00000482139 351 ntBASIC3.44□□□□□ -1.86
PDGFRAP16234 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.44□□□□□ -1.86
PDGFRAP16234 VN1R104P-201ENST00000505115 1009 ntBASIC3.44□□□□□ -1.86
PDGFRAP16234 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.44□□□□□ -1.86
PDGFRAP16234 PHBP14-201ENST00000512887 367 ntBASIC3.44□□□□□ -1.86
PDGFRAP16234 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.44□□□□□ -1.86
PDGFRAP16234 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.44□□□□□ -1.86
PDGFRAP16234 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.44□□□□□ -1.86
PDGFRAP16234 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
PDGFRAP16234 AP005205.1-201ENST00000563503 508 ntBASIC3.44□□□□□ -1.86
PDGFRAP16234 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.44□□□□□ -1.86
PDGFRAP16234 AL031281.1-201ENST00000604049 488 ntBASIC3.44□□□□□ -1.86
PDGFRAP16234 AC106900.2-201ENST00000604994 317 ntBASIC3.44□□□□□ -1.86
PDGFRAP16234 AC013244.3-201ENST00000605614 388 ntBASIC3.44□□□□□ -1.86
PDGFRAP16234 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.44□□□□□ -1.86
PDGFRAP16234 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.44□□□□□ -1.86
PDGFRAP16234 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
PDGFRAP16234 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.44□□□□□ -1.86
PDGFRAP16234 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.44□□□□□ -1.86
PDGFRAP16234 AC103988.1-201ENST00000566382 2177 ntBASIC3.44□□□□□ -1.86
PDGFRAP16234 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
PDGFRAP16234 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
PDGFRAP16234 RNU6-97P-201ENST00000363387 104 ntBASIC3.43□□□□□ -1.86
PDGFRAP16234 RNU6-777P-201ENST00000364265 104 ntBASIC3.43□□□□□ -1.86
PDGFRAP16234 RNU6-744P-201ENST00000365557 107 ntBASIC3.43□□□□□ -1.86
PDGFRAP16234 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PDGFRAP16234 RNU6-1316P-201ENST00000384242 108 ntBASIC3.43□□□□□ -1.86
PDGFRAP16234 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
PDGFRAP16234 AL356421.1-201ENST00000403255 413 ntBASIC3.43□□□□□ -1.86
PDGFRAP16234 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.43□□□□□ -1.86
PDGFRAP16234 RNA5SP120-201ENST00000410900 112 ntBASIC3.43□□□□□ -1.86
PDGFRAP16234 RPL31P12-201ENST00000422587 358 ntBASIC3.43□□□□□ -1.86
PDGFRAP16234 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.43□□□□□ -1.86
PDGFRAP16234 AL035407.1-201ENST00000429211 571 ntBASIC3.43□□□□□ -1.86
PDGFRAP16234 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.43□□□□□ -1.86
PDGFRAP16234 TXNP1-201ENST00000441872 371 ntBASIC3.43□□□□□ -1.86
PDGFRAP16234 AL591503.2-201ENST00000442314 1005 ntBASIC3.43□□□□□ -1.86
PDGFRAP16234 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.43□□□□□ -1.86
PDGFRAP16234 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.43□□□□□ -1.86
PDGFRAP16234 RPL23AP35-201ENST00000451906 501 ntBASIC3.43□□□□□ -1.86
PDGFRAP16234 AC234775.1-201ENST00000454247 670 ntBASIC3.43□□□□□ -1.86
PDGFRAP16234 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.43□□□□□ -1.86
PDGFRAP16234 AC108860.1-201ENST00000484521 383 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms