Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL11A2P13942 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL11A2P13942 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC4.34□□□□□ -1.71
COL11A2P13942 AL136133.1-201ENST00000413694 376 ntBASIC4.34□□□□□ -1.71
COL11A2P13942 AC063979.1-201ENST00000415539 377 ntBASIC4.34□□□□□ -1.71
COL11A2P13942 AL589872.1-201ENST00000426602 288 ntBASIC4.34□□□□□ -1.71
COL11A2P13942 CALM1P1-201ENST00000442082 433 ntBASIC4.34□□□□□ -1.71
COL11A2P13942 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.34□□□□□ -1.71
COL11A2P13942 U3.44-201ENST00000458938 192 ntBASIC4.34□□□□□ -1.71
COL11A2P13942 AC023598.1-201ENST00000472521 361 ntBASIC4.34□□□□□ -1.71
COL11A2P13942 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.34□□□□□ -1.71
COL11A2P13942 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.34□□□□□ -1.71
COL11A2P13942 FGF7P4-201ENST00000509595 295 ntBASIC4.34□□□□□ -1.71
COL11A2P13942 Y_RNA.704-201ENST00000516851 102 ntBASIC4.34□□□□□ -1.71
COL11A2P13942 AC007424.1-203ENST00000554613 687 ntBASIC4.34□□□□□ -1.71
COL11A2P13942 YWHAQP7-201ENST00000603536 658 ntBASIC4.34□□□□□ -1.71
COL11A2P13942 BNIP3P10-201ENST00000605360 577 ntBASIC4.34□□□□□ -1.71
COL11A2P13942 AC104010.1-201ENST00000616889 150 ntBASIC4.34□□□□□ -1.71
COL11A2P13942 AL158801.5-201ENST00000623123 465 ntBASIC4.34□□□□□ -1.71
COL11A2P13942 AP006248.2-201ENST00000623309 592 ntBASIC4.34□□□□□ -1.71
COL11A2P13942 AL596275.2-204ENST00000641628 552 ntBASIC4.34□□□□□ -1.71
COL11A2P13942 AL596275.2-206ENST00000641957 626 ntBASIC4.34□□□□□ -1.71
COL11A2P13942 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
COL11A2P13942 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.34□□□□□ -1.72
COL11A2P13942 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
COL11A2P13942 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.72
COL11A2P13942 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL11A2P13942 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
COL11A2P13942 SAGE2P-201ENST00000420011 2126 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
COL11A2P13942 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL11A2P13942 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.33□□□□□ -1.72
COL11A2P13942 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL11A2P13942 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
COL11A2P13942 Y_RNA.159-201ENST00000363674 87 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 RNU6-332P-201ENST00000391193 108 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 AL603766.1-201ENST00000407763 664 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 Y_RNA.608-201ENST00000410647 95 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 RNU6-195P-201ENST00000411352 109 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 AC017078.1-201ENST00000416146 368 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 AL365400.1-201ENST00000431854 640 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.33□□□□□ -1.72
COL11A2P13942 NDUFA5P4-201ENST00000436704 385 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 LSM1P1-201ENST00000438629 273 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.33□□□□□ -1.72
COL11A2P13942 ARPC3P5-201ENST00000448802 534 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 NIPA2P5-201ENST00000452282 464 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 TRBV12-2-201ENST00000489763 344 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL11A2P13942 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.33□□□□□ -1.72
COL11A2P13942 AC010486.1-201ENST00000511793 424 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 FTH1P9-201ENST00000513251 355 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.33□□□□□ -1.72
COL11A2P13942 Y_RNA.693-201ENST00000516641 110 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.33□□□□□ -1.72
COL11A2P13942 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4.33□□□□□ -1.72
COL11A2P13942 AC093519.1-201ENST00000566109 298 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 MIR544B-201ENST00000582372 78 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 KC877982.1-201ENST00000602313 470 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 RNU6-84P-201ENST00000607737 102 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.33□□□□□ -1.72
COL11A2P13942 AL132765.2-201ENST00000610812 351 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 AC243773.3-201ENST00000613270 256 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.33□□□□□ -1.72
COL11A2P13942 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.33□□□□□ -1.72
COL11A2P13942 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
COL11A2P13942 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL11A2P13942 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL11A2P13942 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL11A2P13942 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
COL11A2P13942 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
COL11A2P13942 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.33□□□□□ -1.72
COL11A2P13942 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.33□□□□□ -1.72
COL11A2P13942 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL11A2P13942 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL11A2P13942 MFSD8-233ENST00000641482 4860 ntBASIC4.33□□□□□ -1.72
COL11A2P13942 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL11A2P13942 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
COL11A2P13942 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL11A2P13942 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL11A2P13942 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
COL11A2P13942 RNA5SP52-201ENST00000362448 134 ntBASIC4.32□□□□□ -1.72
COL11A2P13942 SNORA51.2-201ENST00000364595 132 ntBASIC4.32□□□□□ -1.72
COL11A2P13942 USP9YP36-201ENST00000424581 829 ntBASIC4.32□□□□□ -1.72
COL11A2P13942 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.32□□□□□ -1.72
COL11A2P13942 SAR1AP4-201ENST00000429225 591 ntBASIC4.32□□□□□ -1.72
COL11A2P13942 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.32□□□□□ -1.72
COL11A2P13942 AP000942.1-201ENST00000463969 747 ntBASIC4.32□□□□□ -1.72
COL11A2P13942 RPL5P30-201ENST00000465511 891 ntBASIC4.32□□□□□ -1.72
COL11A2P13942 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.32□□□□□ -1.72
COL11A2P13942 SUMO2P20-201ENST00000520803 283 ntBASIC4.32□□□□□ -1.72
COL11A2P13942 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.32□□□□□ -1.72
COL11A2P13942 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.32□□□□□ -1.72
COL11A2P13942 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.32□□□□□ -1.72
COL11A2P13942 AC090312.2-201ENST00000582687 378 ntBASIC4.32□□□□□ -1.72
COL11A2P13942 BNIP3P23-201ENST00000599655 511 ntBASIC4.32□□□□□ -1.72
COL11A2P13942 AC009233.1-201ENST00000616477 371 ntBASIC4.32□□□□□ -1.72
COL11A2P13942 AC009268.2-201ENST00000621925 457 ntBASIC4.32□□□□□ -1.72
COL11A2P13942 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms