Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CFTRP13569 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
CFTRP13569 Y_RNA.112-201ENST00000363250 102 ntBASIC2.76□□□□□ -1.97
CFTRP13569 RNA5SP105-201ENST00000391123 113 ntBASIC2.76□□□□□ -1.97
CFTRP13569 XKRYP4-201ENST00000414395 483 ntBASIC2.76□□□□□ -1.97
CFTRP13569 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.76□□□□□ -1.97
CFTRP13569 XKRYP5-201ENST00000449659 483 ntBASIC2.76□□□□□ -1.97
CFTRP13569 PTGES3P5-201ENST00000455109 434 ntBASIC2.76□□□□□ -1.97
CFTRP13569 AC078918.1-201ENST00000498515 228 ntBASIC2.76□□□□□ -1.97
CFTRP13569 SNX5P1-201ENST00000505757 1041 ntBASIC2.76□□□□□ -1.97
CFTRP13569 RNU2-58P-201ENST00000516403 183 ntBASIC2.76□□□□□ -1.97
CFTRP13569 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.76□□□□□ -1.97
CFTRP13569 AC006270.2-201ENST00000578523 652 ntBASIC2.76□□□□□ -1.97
CFTRP13569 AP005136.1-201ENST00000579765 429 ntBASIC2.76□□□□□ -1.97
CFTRP13569 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.76□□□□□ -1.97
CFTRP13569 AL590099.1-201ENST00000615276 138 ntBASIC2.76□□□□□ -1.97
CFTRP13569 AC048347.1-201ENST00000624621 427 ntBASIC2.76□□□□□ -1.97
CFTRP13569 AP000553.5-201ENST00000641933 54 ntBASIC2.76□□□□□ -1.97
CFTRP13569 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
CFTRP13569 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.76□□□□□ -1.97
CFTRP13569 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CFTRP13569 RNU2-37P-201ENST00000410695 177 ntBASIC2.75□□□□□ -1.97
CFTRP13569 AL096701.2-201ENST00000416920 238 ntBASIC2.75□□□□□ -1.97
CFTRP13569 RPL7P46-201ENST00000425129 740 ntBASIC2.75□□□□□ -1.97
CFTRP13569 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.75□□□□□ -1.97
CFTRP13569 RNU6-1218P-201ENST00000458990 108 ntBASIC2.75□□□□□ -1.97
CFTRP13569 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2.75□□□□□ -1.97
CFTRP13569 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
CFTRP13569 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.75□□□□□ -1.97
CFTRP13569 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.75□□□□□ -1.97
CFTRP13569 SNORD53B-201ENST00000577887 78 ntBASIC2.75□□□□□ -1.97
CFTRP13569 FAM106CP-201ENST00000582212 507 ntBASIC2.75□□□□□ -1.97
CFTRP13569 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
CFTRP13569 BX649567.1-201ENST00000642071 1134 ntBASIC2.75□□□□□ -1.97
CFTRP13569 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.75□□□□□ -1.97
CFTRP13569 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
CFTRP13569 RNU4-7P-201ENST00000364758 141 ntBASIC2.74□□□□□ -1.97
CFTRP13569 RNU6-1027P-201ENST00000383998 107 ntBASIC2.74□□□□□ -1.97
CFTRP13569 RPL17P12-201ENST00000413391 526 ntBASIC2.74□□□□□ -1.97
CFTRP13569 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.74□□□□□ -1.97
CFTRP13569 USP9YP27-201ENST00000418455 438 ntBASIC2.74□□□□□ -1.97
CFTRP13569 WARS2P1-201ENST00000429678 537 ntBASIC2.74□□□□□ -1.97
CFTRP13569 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.74□□□□□ -1.97
CFTRP13569 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.74□□□□□ -1.97
CFTRP13569 AC010683.1-201ENST00000473673 378 ntBASIC2.74□□□□□ -1.97
CFTRP13569 AC079203.1-201ENST00000487972 404 ntBASIC2.74□□□□□ -1.97
CFTRP13569 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.74□□□□□ -1.97
CFTRP13569 MTCO1P30-201ENST00000515244 580 ntBASIC2.74□□□□□ -1.97
CFTRP13569 SNORA31.26-201ENST00000517250 137 ntBASIC2.74□□□□□ -1.97
CFTRP13569 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CFTRP13569 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.73□□□□□ -1.97
CFTRP13569 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC2.73□□□□□ -1.97
CFTRP13569 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.73□□□□□ -1.97
CFTRP13569 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.73□□□□□ -1.97
CFTRP13569 AC108734.3-201ENST00000481241 1165 ntBASIC2.73□□□□□ -1.97
CFTRP13569 AC090071.1-201ENST00000507713 644 ntBASIC2.73□□□□□ -1.97
CFTRP13569 AC104986.1-201ENST00000517978 436 ntBASIC2.73□□□□□ -1.97
CFTRP13569 AC022790.1-201ENST00000522872 204 ntBASIC2.73□□□□□ -1.97
CFTRP13569 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.73□□□□□ -1.97
CFTRP13569 AL589935.2-201ENST00000616471 1231 ntBASIC2.73□□□□□ -1.97
CFTRP13569 AC012150.2-201ENST00000621300 544 ntBASIC2.73□□□□□ -1.97
CFTRP13569 AC006026.1-201ENST00000444025 1803 ntBASIC2.72□□□□□ -1.97
CFTRP13569 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.72□□□□□ -1.97
CFTRP13569 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.72□□□□□ -1.97
CFTRP13569 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.72□□□□□ -1.97
CFTRP13569 AL109741.2-201ENST00000455561 343 ntBASIC2.72□□□□□ -1.97
CFTRP13569 HAUS1P1-201ENST00000505275 832 ntBASIC2.72□□□□□ -1.97
CFTRP13569 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.72□□□□□ -1.97
CFTRP13569 AL110115.1-201ENST00000614396 364 ntBASIC2.72□□□□□ -1.97
CFTRP13569 MIR4278-201ENST00000636094 69 ntBASIC2.72□□□□□ -1.97
CFTRP13569 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
CFTRP13569 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
CFTRP13569 MIR92A2-201ENST00000385299 75 ntBASIC2.71□□□□□ -1.97
CFTRP13569 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.97
CFTRP13569 AC114973.1-201ENST00000429057 632 ntBASIC2.71□□□□□ -1.97
CFTRP13569 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.71□□□□□ -1.97
CFTRP13569 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.71□□□□□ -1.97
CFTRP13569 AC015720.1-201ENST00000565251 277 ntBASIC2.71□□□□□ -1.97
CFTRP13569 MIR4452-201ENST00000583004 71 ntBASIC2.71□□□□□ -1.97
CFTRP13569 SEPT7P9-203ENST00000604116 343 ntBASIC2.71□□□□□ -1.97
CFTRP13569 AC098679.5-201ENST00000624394 571 ntBASIC2.71□□□□□ -1.97
CFTRP13569 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.71□□□□□ -1.97
CFTRP13569 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.71□□□□□ -1.97
CFTRP13569 RNA5SP138-201ENST00000365098 114 ntBASIC2.71□□□□□ -1.98
CFTRP13569 HSPE1P26-201ENST00000405341 275 ntBASIC2.71□□□□□ -1.98
CFTRP13569 RPS3AP9-201ENST00000417027 792 ntBASIC2.71□□□□□ -1.98
CFTRP13569 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.71□□□□□ -1.98
CFTRP13569 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.71□□□□□ -1.98
CFTRP13569 RPS26P21-201ENST00000475397 348 ntBASIC2.71□□□□□ -1.98
CFTRP13569 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CFTRP13569 RAC1P5-201ENST00000512182 576 ntBASIC2.71□□□□□ -1.98
CFTRP13569 RNA5SP480-201ENST00000516840 109 ntBASIC2.71□□□□□ -1.98
CFTRP13569 ZNF192P1-203ENST00000565888 810 ntBASIC2.71□□□□□ -1.98
CFTRP13569 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC2.71□□□□□ -1.98
CFTRP13569 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.71□□□□□ -1.98
CFTRP13569 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CFTRP13569 RNU6-225P-201ENST00000384613 103 ntBASIC2.7□□□□□ -1.98
CFTRP13569 RPL31P52-201ENST00000407532 367 ntBASIC2.7□□□□□ -1.98
CFTRP13569 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.7□□□□□ -1.98
CFTRP13569 RPL30P3-201ENST00000424262 333 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms