Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 RNU6-711P-201ENST00000517255 106 ntBASIC2.24□□□□□ -2.05
CD28P10747 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.24□□□□□ -2.05
CD28P10747 CA1-215ENST00000522389 551 ntTSL 3 BASIC2.24□□□□□ -2.05
CD28P10747 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.24□□□□□ -2.05
CD28P10747 AC239860.2-201ENST00000525886 270 ntBASIC2.24□□□□□ -2.05
CD28P10747 AC022690.1-201ENST00000526681 550 ntBASIC2.24□□□□□ -2.05
CD28P10747 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.24□□□□□ -2.05
CD28P10747 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.24□□□□□ -2.05
CD28P10747 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.24□□□□□ -2.05
CD28P10747 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.24□□□□□ -2.05
CD28P10747 AP005205.1-201ENST00000563503 508 ntBASIC2.24□□□□□ -2.05
CD28P10747 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.24□□□□□ -2.05
CD28P10747 AC034268.2-201ENST00000571784 482 ntBASIC2.24□□□□□ -2.05
CD28P10747 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.24□□□□□ -2.05
CD28P10747 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.24□□□□□ -2.05
CD28P10747 AL606834.3-201ENST00000602615 496 ntBASIC2.24□□□□□ -2.05
CD28P10747 AC080013.4-201ENST00000607624 649 ntBASIC2.24□□□□□ -2.05
CD28P10747 AC009570.1-201ENST00000609599 745 ntBASIC2.24□□□□□ -2.05
CD28P10747 AC024257.5-201ENST00000612739 531 ntBASIC2.24□□□□□ -2.05
CD28P10747 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.24□□□□□ -2.05
CD28P10747 AC004009.2-201ENST00000623016 728 ntBASIC2.24□□□□□ -2.05
CD28P10747 MIR1322-201ENST00000638013 71 ntBASIC2.24□□□□□ -2.05
CD28P10747 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
CD28P10747 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CD28P10747 AC103988.1-201ENST00000566382 2177 ntBASIC2.24□□□□□ -2.05
CD28P10747 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.24□□□□□ -2.05
CD28P10747 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.24□□□□□ -2.05
CD28P10747 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.23□□□□□ -2.05
CD28P10747 AC107982.1-201ENST00000507171 1300 ntBASIC2.23□□□□□ -2.05
CD28P10747 AC080100.1-201ENST00000624239 5356 ntBASIC2.23□□□□□ -2.05
CD28P10747 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.23□□□□□ -2.05
CD28P10747 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.23□□□□□ -2.05
CD28P10747 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CD28P10747 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CD28P10747 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CD28P10747 NACA3P-201ENST00000359690 648 ntBASIC2.23□□□□□ -2.05
CD28P10747 snoZ40.1-201ENST00000364540 72 ntBASIC2.23□□□□□ -2.05
CD28P10747 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.23□□□□□ -2.05
CD28P10747 RNU6-298P-201ENST00000390888 96 ntBASIC2.23□□□□□ -2.05
CD28P10747 RNU6-882P-201ENST00000391025 103 ntBASIC2.23□□□□□ -2.05
CD28P10747 RPS3AP26-201ENST00000398259 784 ntBASIC2.23□□□□□ -2.05
CD28P10747 RN7SKP123-201ENST00000410732 291 ntBASIC2.23□□□□□ -2.05
CD28P10747 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.23□□□□□ -2.05
CD28P10747 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.23□□□□□ -2.05
CD28P10747 Z75741.2-201ENST00000417272 1167 ntBASIC2.23□□□□□ -2.05
CD28P10747 AC007742.1-201ENST00000425789 329 ntBASIC2.23□□□□□ -2.05
CD28P10747 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.23□□□□□ -2.05
CD28P10747 ELOCP26-201ENST00000436067 329 ntBASIC2.23□□□□□ -2.05
CD28P10747 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.23□□□□□ -2.05
CD28P10747 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.23□□□□□ -2.05
CD28P10747 OR6K5P-201ENST00000447050 945 ntBASIC2.23□□□□□ -2.05
CD28P10747 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.23□□□□□ -2.05
CD28P10747 AL353691.1-201ENST00000451332 387 ntBASIC2.23□□□□□ -2.05
CD28P10747 RN7SL432P-201ENST00000484057 298 ntBASIC2.23□□□□□ -2.05
CD28P10747 RN7SL633P-201ENST00000488974 297 ntBASIC2.23□□□□□ -2.05
CD28P10747 AC090453.1-201ENST00000495560 436 ntBASIC2.23□□□□□ -2.05
CD28P10747 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.23□□□□□ -2.05
CD28P10747 COX7A2P2-201ENST00000505291 250 ntBASIC2.23□□□□□ -2.05
CD28P10747 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.23□□□□□ -2.05
CD28P10747 AC093752.1-206ENST00000511823 336 ntBASIC2.23□□□□□ -2.05
CD28P10747 RNU6-1225P-201ENST00000516336 65 ntBASIC2.23□□□□□ -2.05
CD28P10747 SNORA31.26-201ENST00000517250 137 ntBASIC2.23□□□□□ -2.05
CD28P10747 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CD28P10747 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.23□□□□□ -2.05
CD28P10747 FAM60DP-201ENST00000524174 632 ntBASIC2.23□□□□□ -2.05
CD28P10747 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CD28P10747 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.23□□□□□ -2.05
CD28P10747 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.23□□□□□ -2.05
CD28P10747 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.23□□□□□ -2.05
CD28P10747 AC079600.2-201ENST00000550076 130 ntBASIC2.23□□□□□ -2.05
CD28P10747 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.23□□□□□ -2.05
CD28P10747 AC090079.2-201ENST00000575289 768 ntBASIC2.23□□□□□ -2.05
CD28P10747 MIR3162-201ENST00000581818 82 ntBASIC2.23□□□□□ -2.05
CD28P10747 DNAJC19P3-201ENST00000594491 331 ntBASIC2.23□□□□□ -2.05
CD28P10747 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.23□□□□□ -2.05
CD28P10747 AC009237.15-201ENST00000610252 501 ntBASIC2.23□□□□□ -2.05
CD28P10747 AC106028.5-201ENST00000610332 395 ntBASIC2.23□□□□□ -2.05
CD28P10747 AC025588.4-201ENST00000615802 908 ntBASIC2.23□□□□□ -2.05
CD28P10747 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CD28P10747 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.23□□□□□ -2.05
CD28P10747 AC022509.4-201ENST00000621404 572 ntBASIC2.23□□□□□ -2.05
CD28P10747 OR1S1-201ENST00000624470 978 ntBASIC2.23□□□□□ -2.05
CD28P10747 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
CD28P10747 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.23□□□□□ -2.05
CD28P10747 AC009812.4-201ENST00000569134 1805 ntBASIC2.23□□□□□ -2.05
CD28P10747 OR4G11P-202ENST00000642116 1414 ntBASIC2.23□□□□□ -2.05
CD28P10747 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.23□□□□□ -2.05
CD28P10747 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CD28P10747 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CD28P10747 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
CD28P10747 CDR1-202ENST00000625883 1485 ntBASIC2.22□□□□□ -2.05
CD28P10747 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CD28P10747 AC062016.1-201ENST00000355719 319 ntBASIC2.22□□□□□ -2.05
CD28P10747 RNU5D-1-201ENST00000363299 116 ntBASIC2.22□□□□□ -2.05
CD28P10747 SNORA40.2-201ENST00000390847 128 ntBASIC2.22□□□□□ -2.05
CD28P10747 AL031679.1-201ENST00000400616 525 ntBASIC2.22□□□□□ -2.05
CD28P10747 HMGB1P17-201ENST00000403495 628 ntBASIC2.22□□□□□ -2.05
CD28P10747 RNA5SP80-201ENST00000410475 111 ntBASIC2.22□□□□□ -2.05
CD28P10747 RNU2-52P-201ENST00000410680 190 ntBASIC2.22□□□□□ -2.05
CD28P10747 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms