Protein–RNA interactions for Protein: P03905

MT-ND4, NADH-ubiquinone oxidoreductase chain 4, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND4P03905 BX664608.1-201ENST00000610519 487 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 SNHG22-203ENST00000617833 660 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 AL356585.4-201ENST00000623078 1229 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 AC109454.4-201ENST00000623411 649 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 AC126544.2-201ENST00000625174 749 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 AC000403.1-201ENST00000613696 3585 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.39□□□□□ -2.03
MT-ND4P03905 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
MT-ND4P03905 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.39□□□□□ -2.03
MT-ND4P03905 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.39□□□□□ -2.03
MT-ND4P03905 AC096644.4-201ENST00000563417 2912 ntBASIC2.38□□□□□ -2.03
MT-ND4P03905 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.38□□□□□ -2.03
MT-ND4P03905 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.38□□□□□ -2.03
MT-ND4P03905 ANKRD36P1-201ENST00000344424 659 ntBASIC2.38□□□□□ -2.03
MT-ND4P03905 RNA5SP374-201ENST00000362939 125 ntBASIC2.38□□□□□ -2.03
MT-ND4P03905 MIR493-201ENST00000385254 89 ntBASIC2.38□□□□□ -2.03
MT-ND4P03905 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.38□□□□□ -2.03
MT-ND4P03905 AL450338.1-201ENST00000407987 512 ntBASIC2.38□□□□□ -2.03
MT-ND4P03905 RNU2-25P-201ENST00000411041 191 ntBASIC2.38□□□□□ -2.03
MT-ND4P03905 AC096533.1-201ENST00000411645 353 ntBASIC2.38□□□□□ -2.03
MT-ND4P03905 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.38□□□□□ -2.03
MT-ND4P03905 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.38□□□□□ -2.03
MT-ND4P03905 AC022018.1-201ENST00000430685 241 ntBASIC2.38□□□□□ -2.03
MT-ND4P03905 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.38□□□□□ -2.03
MT-ND4P03905 AC004866.2-201ENST00000438285 481 ntBASIC2.38□□□□□ -2.03
MT-ND4P03905 OR6K5P-201ENST00000447050 945 ntBASIC2.38□□□□□ -2.03
MT-ND4P03905 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.38□□□□□ -2.03
MT-ND4P03905 RPL7P49-201ENST00000471402 708 ntBASIC2.38□□□□□ -2.03
MT-ND4P03905 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
MT-ND4P03905 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
MT-ND4P03905 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.38□□□□□ -2.03
MT-ND4P03905 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.38□□□□□ -2.03
MT-ND4P03905 RPPH1-2P-201ENST00000516688 293 ntBASIC2.38□□□□□ -2.03
MT-ND4P03905 RN7SKP40-201ENST00000517211 242 ntBASIC2.38□□□□□ -2.03
MT-ND4P03905 DEFB130C-202ENST00000530001 230 ntBASIC2.38□□□□□ -2.03
MT-ND4P03905 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.38□□□□□ -2.03
MT-ND4P03905 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.38□□□□□ -2.03
MT-ND4P03905 AC024224.1-201ENST00000538284 609 ntBASIC2.38□□□□□ -2.03
MT-ND4P03905 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.38□□□□□ -2.03
MT-ND4P03905 SETP7-201ENST00000552169 453 ntBASIC2.38□□□□□ -2.03
MT-ND4P03905 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.38□□□□□ -2.03
MT-ND4P03905 SRGNP1-201ENST00000603392 451 ntBASIC2.38□□□□□ -2.03
MT-ND4P03905 AL160237.3-201ENST00000604114 1013 ntBASIC2.38□□□□□ -2.03
MT-ND4P03905 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC2.38□□□□□ -2.03
MT-ND4P03905 AC010872.1-201ENST00000624225 675 ntBASIC2.38□□□□□ -2.03
MT-ND4P03905 AL513185.3-201ENST00000433335 1300 ntBASIC2.38□□□□□ -2.03
MT-ND4P03905 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
MT-ND4P03905 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
MT-ND4P03905 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.37□□□□□ -2.03
MT-ND4P03905 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
MT-ND4P03905 SNRPEP3-201ENST00000338402 276 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 MIR422A-201ENST00000362286 90 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 Y_RNA.25-201ENST00000362528 102 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 RNU6-173P-201ENST00000364215 104 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.37□□□□□ -2.03
MT-ND4P03905 MIR627-201ENST00000384979 97 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 MIR506-201ENST00000384998 124 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 RNA5SP171-201ENST00000391071 115 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 MTCO1P56-201ENST00000401674 224 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.37□□□□□ -2.03
MT-ND4P03905 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.37□□□□□ -2.03
MT-ND4P03905 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 EZH2P1-201ENST00000431167 291 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.37□□□□□ -2.03
MT-ND4P03905 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.37□□□□□ -2.03
MT-ND4P03905 RPS20P5-201ENST00000434808 360 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC2.37□□□□□ -2.03
MT-ND4P03905 RPL39P6-201ENST00000448289 150 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 AC005297.2-201ENST00000450430 606 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.37□□□□□ -2.03
MT-ND4P03905 CAB39P1-201ENST00000502277 460 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 AC008427.1-201ENST00000503102 655 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 AC083906.5-201ENST00000503722 328 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 COX7A2P2-201ENST00000505291 250 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 AC069306.1-201ENST00000507006 843 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 RNU6-1028P-201ENST00000517164 93 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 OR7K1P-201ENST00000546439 926 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 GTF2IP8-201ENST00000560687 584 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 AP005205.1-201ENST00000563503 508 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.37□□□□□ -2.03
MT-ND4P03905 MIR1254-2-201ENST00000579553 63 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 ZNF861P-201ENST00000588126 639 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.37□□□□□ -2.03
MT-ND4P03905 AL035411.2-201ENST00000604022 421 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 HSPE1P7-201ENST00000604681 321 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 AC012443.1-201ENST00000605605 231 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 AC140725.3-201ENST00000616193 880 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 AC103798.2-201ENST00000624292 632 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.37□□□□□ -2.03
MT-ND4P03905 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
MT-ND4P03905 AP005901.5-201ENST00000545779 1796 ntBASIC2.36□□□□□ -2.03
MT-ND4P03905 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
MT-ND4P03905 OR4G11P-202ENST00000642116 1414 ntBASIC2.36□□□□□ -2.03
MT-ND4P03905 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.36□□□□□ -2.03
MT-ND4P03905 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
MT-ND4P03905 MIR26A1-201ENST00000362205 77 ntBASIC2.36□□□□□ -2.03
MT-ND4P03905 MIR135A2-201ENST00000384854 100 ntBASIC2.36□□□□□ -2.03
MT-ND4P03905 RNU6-882P-201ENST00000391025 103 ntBASIC2.36□□□□□ -2.03
MT-ND4P03905 AL138885.1-201ENST00000405921 675 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms