Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RNU6-921P-201ENST00000384361 107 ntBASIC2.47□□□□□ -2.01
APOEP02649 AL356320.2-201ENST00000417263 507 ntBASIC2.47□□□□□ -2.01
APOEP02649 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.47□□□□□ -2.01
APOEP02649 AC004022.1-201ENST00000447766 1066 ntBASIC2.47□□□□□ -2.01
APOEP02649 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.47□□□□□ -2.01
APOEP02649 AC010099.1-201ENST00000455434 375 ntBASIC2.47□□□□□ -2.01
APOEP02649 MRPL42P6-201ENST00000486397 371 ntBASIC2.47□□□□□ -2.01
APOEP02649 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.47□□□□□ -2.01
APOEP02649 HMGB3P3-201ENST00000510526 400 ntBASIC2.47□□□□□ -2.01
APOEP02649 RPL23AP94-201ENST00000512518 302 ntBASIC2.47□□□□□ -2.01
APOEP02649 AC118465.1-201ENST00000513820 1271 ntBASIC2.47□□□□□ -2.01
APOEP02649 AC018630.1-201ENST00000541376 925 ntBASIC2.47□□□□□ -2.01
APOEP02649 AP002770.2-201ENST00000543613 532 ntBASIC2.47□□□□□ -2.01
APOEP02649 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.47□□□□□ -2.01
APOEP02649 VN1R78P-201ENST00000597393 564 ntBASIC2.47□□□□□ -2.01
APOEP02649 AC007938.3-201ENST00000604965 623 ntBASIC2.47□□□□□ -2.01
APOEP02649 AC067747.1-201ENST00000608026 250 ntBASIC2.47□□□□□ -2.01
APOEP02649 AC068722.2-201ENST00000618734 544 ntBASIC2.47□□□□□ -2.01
APOEP02649 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.47□□□□□ -2.01
APOEP02649 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
APOEP02649 MIR21-201ENST00000362134 72 ntBASIC2.46□□□□□ -2.02
APOEP02649 RNU5D-1-201ENST00000363299 116 ntBASIC2.46□□□□□ -2.02
APOEP02649 SNORA67.4-201ENST00000384688 142 ntBASIC2.46□□□□□ -2.02
APOEP02649 MIR649-201ENST00000384843 97 ntBASIC2.46□□□□□ -2.02
APOEP02649 TAS2R15P-201ENST00000390674 928 ntBASIC2.46□□□□□ -2.02
APOEP02649 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.46□□□□□ -2.02
APOEP02649 AC099677.1-201ENST00000420575 175 ntBASIC2.46□□□□□ -2.02
APOEP02649 AL139413.1-201ENST00000421309 217 ntBASIC2.46□□□□□ -2.02
APOEP02649 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.46□□□□□ -2.02
APOEP02649 TMEM167AP1-201ENST00000423409 219 ntBASIC2.46□□□□□ -2.02
APOEP02649 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.46□□□□□ -2.02
APOEP02649 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC2.46□□□□□ -2.02
APOEP02649 OR6K5P-201ENST00000447050 945 ntBASIC2.46□□□□□ -2.02
APOEP02649 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
APOEP02649 MTND2P19-201ENST00000449129 1012 ntBASIC2.46□□□□□ -2.02
APOEP02649 LINC00888-204ENST00000487386 421 ntBASIC2.46□□□□□ -2.02
APOEP02649 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.46□□□□□ -2.02
APOEP02649 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.46□□□□□ -2.02
APOEP02649 AP003467.2-201ENST00000520175 319 ntBASIC2.46□□□□□ -2.02
APOEP02649 AP003122.3-201ENST00000526316 255 ntBASIC2.46□□□□□ -2.02
APOEP02649 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.46□□□□□ -2.02
APOEP02649 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.46□□□□□ -2.02
APOEP02649 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.46□□□□□ -2.02
APOEP02649 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.46□□□□□ -2.02
APOEP02649 AC090617.9-201ENST00000623751 147 ntBASIC2.46□□□□□ -2.02
APOEP02649 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
APOEP02649 AC007336.1-201ENST00000576365 3828 ntBASIC2.45□□□□□ -2.02
APOEP02649 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.45□□□□□ -2.02
APOEP02649 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
APOEP02649 RNA5SP289-201ENST00000362332 137 ntBASIC2.45□□□□□ -2.02
APOEP02649 AL445529.1-201ENST00000398713 389 ntBASIC2.45□□□□□ -2.02
APOEP02649 RNA5SP508-201ENST00000411327 119 ntBASIC2.45□□□□□ -2.02
APOEP02649 AC009237.2-201ENST00000421358 284 ntBASIC2.45□□□□□ -2.02
APOEP02649 AC012497.1-201ENST00000429392 575 ntBASIC2.45□□□□□ -2.02
APOEP02649 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.45□□□□□ -2.02
APOEP02649 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.45□□□□□ -2.02
APOEP02649 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.45□□□□□ -2.02
APOEP02649 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.45□□□□□ -2.02
APOEP02649 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.45□□□□□ -2.02
APOEP02649 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.45□□□□□ -2.02
APOEP02649 XKRY-201ENST00000510392 1100 ntBASIC2.45□□□□□ -2.02
APOEP02649 AC107222.1-201ENST00000510899 637 ntBASIC2.45□□□□□ -2.02
APOEP02649 AC112673.1-201ENST00000513168 575 ntBASIC2.45□□□□□ -2.02
APOEP02649 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.45□□□□□ -2.02
APOEP02649 AC087272.1-201ENST00000523624 533 ntBASIC2.45□□□□□ -2.02
APOEP02649 OR4P1P-201ENST00000530808 1136 ntBASIC2.45□□□□□ -2.02
APOEP02649 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.45□□□□□ -2.02
APOEP02649 AC012414.2-201ENST00000559474 187 ntBASIC2.45□□□□□ -2.02
APOEP02649 AC106734.1-201ENST00000568646 663 ntBASIC2.45□□□□□ -2.02
APOEP02649 AC105137.2-201ENST00000569073 466 ntBASIC2.45□□□□□ -2.02
APOEP02649 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.45□□□□□ -2.02
APOEP02649 MIR5694-201ENST00000581190 76 ntBASIC2.45□□□□□ -2.02
APOEP02649 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.45□□□□□ -2.02
APOEP02649 AC046143.2-201ENST00000609789 160 ntBASIC2.45□□□□□ -2.02
APOEP02649 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.45□□□□□ -2.02
APOEP02649 AC098679.5-201ENST00000624394 571 ntBASIC2.45□□□□□ -2.02
APOEP02649 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.45□□□□□ -2.02
APOEP02649 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.45□□□□□ -2.02
APOEP02649 AC010149.2-201ENST00000637608 315 ntBASIC2.45□□□□□ -2.02
APOEP02649 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
APOEP02649 AL513185.3-201ENST00000433335 1300 ntBASIC2.44□□□□□ -2.02
APOEP02649 SEC63P2-201ENST00000503863 1939 ntBASIC2.44□□□□□ -2.02
APOEP02649 ZNF519P1-201ENST00000449011 1626 ntBASIC2.44□□□□□ -2.02
APOEP02649 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.44□□□□□ -2.02
APOEP02649 CYCSP45-201ENST00000402289 315 ntBASIC2.44□□□□□ -2.02
APOEP02649 RN7SKP140-201ENST00000411196 284 ntBASIC2.44□□□□□ -2.02
APOEP02649 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.44□□□□□ -2.02
APOEP02649 RPL7P30-201ENST00000420888 709 ntBASIC2.44□□□□□ -2.02
APOEP02649 MORF4L1P7-201ENST00000426038 703 ntBASIC2.44□□□□□ -2.02
APOEP02649 MTATP6P11-201ENST00000428071 670 ntBASIC2.44□□□□□ -2.02
APOEP02649 RPL7P36-201ENST00000444633 681 ntBASIC2.44□□□□□ -2.02
APOEP02649 HIGD1AP2-201ENST00000446367 280 ntBASIC2.44□□□□□ -2.02
APOEP02649 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
APOEP02649 AC034102.8-201ENST00000615146 484 ntBASIC2.44□□□□□ -2.02
APOEP02649 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.44□□□□□ -2.02
APOEP02649 AC130650.2-201ENST00000618736 2403 ntBASIC2.44□□□□□ -2.02
APOEP02649 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.44□□□□□ -2.02
APOEP02649 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.44□□□□□ -2.02
APOEP02649 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
APOEP02649 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms