Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SNORD13-201ENST00000459299 104 ntBASIC2.3□□□□□ -2.04
COL1A1P02452 AC025033.1-201ENST00000463883 194 ntBASIC2.3□□□□□ -2.04
COL1A1P02452 HMGN2P13-201ENST00000476476 274 ntBASIC2.3□□□□□ -2.04
COL1A1P02452 RPL23AP63-201ENST00000498752 471 ntBASIC2.3□□□□□ -2.04
COL1A1P02452 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.3□□□□□ -2.04
COL1A1P02452 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.3□□□□□ -2.04
COL1A1P02452 MTND4LP24-201ENST00000572277 291 ntBASIC2.3□□□□□ -2.04
COL1A1P02452 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.3□□□□□ -2.04
COL1A1P02452 AC091046.2-201ENST00000620775 665 ntBASIC2.3□□□□□ -2.04
COL1A1P02452 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.3□□□□□ -2.04
COL1A1P02452 AC090897.3-201ENST00000636973 1157 ntBASIC2.3□□□□□ -2.04
COL1A1P02452 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
COL1A1P02452 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
COL1A1P02452 AC002546.1-201ENST00000588041 2504 ntBASIC2.29□□□□□ -2.04
COL1A1P02452 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
COL1A1P02452 RNU6-167P-201ENST00000384292 106 ntBASIC2.29□□□□□ -2.04
COL1A1P02452 HSPE1P1-201ENST00000421494 318 ntBASIC2.29□□□□□ -2.04
COL1A1P02452 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.29□□□□□ -2.04
COL1A1P02452 RNU1-61P-201ENST00000516107 151 ntBASIC2.29□□□□□ -2.04
COL1A1P02452 RNA5SP490-201ENST00000517141 136 ntBASIC2.29□□□□□ -2.04
COL1A1P02452 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.29□□□□□ -2.04
COL1A1P02452 AC239860.2-201ENST00000525886 270 ntBASIC2.29□□□□□ -2.04
COL1A1P02452 COX6CP5-201ENST00000527162 228 ntBASIC2.29□□□□□ -2.04
COL1A1P02452 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.29□□□□□ -2.04
COL1A1P02452 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.29□□□□□ -2.04
COL1A1P02452 RPL23AP78-201ENST00000599928 470 ntBASIC2.29□□□□□ -2.04
COL1A1P02452 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.29□□□□□ -2.04
COL1A1P02452 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.29□□□□□ -2.04
COL1A1P02452 RNA5SP190-201ENST00000365222 118 ntBASIC2.28□□□□□ -2.04
COL1A1P02452 RNA5SP37-201ENST00000365420 130 ntBASIC2.28□□□□□ -2.04
COL1A1P02452 SNORA40.18-201ENST00000391200 128 ntBASIC2.28□□□□□ -2.04
COL1A1P02452 RPL21P75-201ENST00000396599 483 ntBASIC2.28□□□□□ -2.04
COL1A1P02452 RPL21P1-201ENST00000399532 476 ntBASIC2.28□□□□□ -2.04
COL1A1P02452 RPL21P28-201ENST00000401418 483 ntBASIC2.28□□□□□ -2.04
COL1A1P02452 AL592114.1-201ENST00000403842 483 ntBASIC2.28□□□□□ -2.04
COL1A1P02452 AL138880.1-201ENST00000405824 642 ntBASIC2.28□□□□□ -2.04
COL1A1P02452 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
COL1A1P02452 HMGN2P35-201ENST00000412164 270 ntBASIC2.28□□□□□ -2.04
COL1A1P02452 USP9YP6-201ENST00000413550 854 ntBASIC2.28□□□□□ -2.04
COL1A1P02452 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.28□□□□□ -2.04
COL1A1P02452 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.28□□□□□ -2.04
COL1A1P02452 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.28□□□□□ -2.04
COL1A1P02452 RPL23AP76-201ENST00000441860 458 ntBASIC2.28□□□□□ -2.04
COL1A1P02452 USP9YP34-201ENST00000453983 808 ntBASIC2.28□□□□□ -2.04
COL1A1P02452 AC073901.1-201ENST00000462471 408 ntBASIC2.28□□□□□ -2.04
COL1A1P02452 RPL5P13-201ENST00000462840 709 ntBASIC2.28□□□□□ -2.04
COL1A1P02452 RPS26P21-201ENST00000475397 348 ntBASIC2.28□□□□□ -2.04
COL1A1P02452 RPL21P16-201ENST00000495531 483 ntBASIC2.28□□□□□ -2.04
COL1A1P02452 RPL23AP55-201ENST00000498163 452 ntBASIC2.28□□□□□ -2.04
COL1A1P02452 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.28□□□□□ -2.04
COL1A1P02452 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.28□□□□□ -2.04
COL1A1P02452 AP003385.6-201ENST00000531603 374 ntBASIC2.28□□□□□ -2.04
COL1A1P02452 RN7SL622P-201ENST00000585292 275 ntBASIC2.28□□□□□ -2.04
COL1A1P02452 PCNAP1-202ENST00000595299 752 ntBASIC2.28□□□□□ -2.04
COL1A1P02452 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.28□□□□□ -2.04
COL1A1P02452 MTCO2P22-201ENST00000603246 681 ntBASIC2.28□□□□□ -2.04
COL1A1P02452 AL121594.5-201ENST00000631724 573 ntBASIC2.28□□□□□ -2.04
COL1A1P02452 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.28□□□□□ -2.04
COL1A1P02452 AC027514.1-201ENST00000588561 1603 ntBASIC2.28□□□□□ -2.04
COL1A1P02452 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
COL1A1P02452 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.27□□□□□ -2.05
COL1A1P02452 SET-203ENST00000372688 801 ntTSL 2 BASIC2.27□□□□□ -2.05
COL1A1P02452 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
COL1A1P02452 RPL21P66-201ENST00000426566 466 ntBASIC2.27□□□□□ -2.05
COL1A1P02452 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC2.27□□□□□ -2.05
COL1A1P02452 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.27□□□□□ -2.05
COL1A1P02452 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.27□□□□□ -2.05
COL1A1P02452 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC2.27□□□□□ -2.05
COL1A1P02452 AC115085.1-201ENST00000588924 229 ntBASIC2.27□□□□□ -2.05
COL1A1P02452 AC020895.1-201ENST00000595362 272 ntBASIC2.27□□□□□ -2.05
COL1A1P02452 AC068790.3-201ENST00000602988 553 ntBASIC2.27□□□□□ -2.05
COL1A1P02452 AC092954.1-201ENST00000609121 445 ntBASIC2.27□□□□□ -2.05
COL1A1P02452 AC016252.1-201ENST00000609721 474 ntBASIC2.27□□□□□ -2.05
COL1A1P02452 AC010678.1-201ENST00000614118 713 ntBASIC2.27□□□□□ -2.05
COL1A1P02452 MIR7973-1-201ENST00000614683 76 ntBASIC2.27□□□□□ -2.05
COL1A1P02452 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.27□□□□□ -2.05
COL1A1P02452 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.27□□□□□ -2.05
COL1A1P02452 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
COL1A1P02452 AC026241.1-201ENST00000517873 2142 ntBASIC2.27□□□□□ -2.05
COL1A1P02452 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.27□□□□□ -2.05
COL1A1P02452 RNU6-582P-201ENST00000362989 107 ntBASIC2.26□□□□□ -2.05
COL1A1P02452 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.26□□□□□ -2.05
COL1A1P02452 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.26□□□□□ -2.05
COL1A1P02452 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.26□□□□□ -2.05
COL1A1P02452 AL513343.1-201ENST00000451818 792 ntBASIC2.26□□□□□ -2.05
COL1A1P02452 AP001960.1-201ENST00000506494 658 ntBASIC2.26□□□□□ -2.05
COL1A1P02452 SNORD59.2-201ENST00000516873 68 ntBASIC2.26□□□□□ -2.05
COL1A1P02452 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
COL1A1P02452 HMGN2P28-201ENST00000606102 262 ntBASIC2.26□□□□□ -2.05
COL1A1P02452 AC084768.2-201ENST00000622736 221 ntBASIC2.26□□□□□ -2.05
COL1A1P02452 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.26□□□□□ -2.05
COL1A1P02452 AC011978.2-201ENST00000569835 2054 ntBASIC2.26□□□□□ -2.05
COL1A1P02452 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
COL1A1P02452 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
COL1A1P02452 RNU6-457P-201ENST00000363999 107 ntBASIC2.26□□□□□ -2.05
COL1A1P02452 Y_RNA.224-201ENST00000364308 111 ntBASIC2.26□□□□□ -2.05
COL1A1P02452 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.26□□□□□ -2.05
COL1A1P02452 BUD31P2-201ENST00000449374 300 ntBASIC2.26□□□□□ -2.05
COL1A1P02452 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.26□□□□□ -2.05
COL1A1P02452 AC109486.1-201ENST00000486833 374 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms