Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
ALDH1A1P00352 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
ALDH1A1P00352 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.05□□□□□ -1.44
ALDH1A1P00352 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ALDH1A1P00352 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ALDH1A1P00352 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ALDH1A1P00352 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
ALDH1A1P00352 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ALDH1A1P00352 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.05□□□□□ -1.44
ALDH1A1P00352 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ALDH1A1P00352 RNU6-1317P-201ENST00000364582 104 ntBASIC6.05□□□□□ -1.44
ALDH1A1P00352 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
ALDH1A1P00352 RNU6-225P-201ENST00000384613 103 ntBASIC6.05□□□□□ -1.44
ALDH1A1P00352 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
ALDH1A1P00352 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC6.05□□□□□ -1.44
ALDH1A1P00352 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ALDH1A1P00352 AL445305.1-201ENST00000432577 575 ntBASIC6.05□□□□□ -1.44
ALDH1A1P00352 OR4C10P-201ENST00000434991 931 ntBASIC6.05□□□□□ -1.44
ALDH1A1P00352 NDUFB4P10-201ENST00000452541 359 ntBASIC6.05□□□□□ -1.44
ALDH1A1P00352 AL049830.2-201ENST00000480072 201 ntBASIC6.05□□□□□ -1.44
ALDH1A1P00352 AC005726.1-201ENST00000494679 427 ntBASIC6.05□□□□□ -1.44
ALDH1A1P00352 KRTAP5-14P-201ENST00000502328 121 ntBASIC6.05□□□□□ -1.44
ALDH1A1P00352 RNU6-479P-201ENST00000516348 105 ntBASIC6.05□□□□□ -1.44
ALDH1A1P00352 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC6.05□□□□□ -1.44
ALDH1A1P00352 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.05□□□□□ -1.44
ALDH1A1P00352 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.05□□□□□ -1.44
ALDH1A1P00352 BNIP3P5-201ENST00000562290 498 ntBASIC6.05□□□□□ -1.44
ALDH1A1P00352 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
ALDH1A1P00352 ELOCP5-201ENST00000604924 333 ntBASIC6.05□□□□□ -1.44
ALDH1A1P00352 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC6.05□□□□□ -1.44
ALDH1A1P00352 MIR1244-1-201ENST00000612829 85 ntBASIC6.05□□□□□ -1.44
ALDH1A1P00352 U2.14-201ENST00000615943 113 ntBASIC6.05□□□□□ -1.44
ALDH1A1P00352 U1.31-201ENST00000620022 160 ntBASIC6.05□□□□□ -1.44
ALDH1A1P00352 MIR1244-3-201ENST00000635744 85 ntBASIC6.05□□□□□ -1.44
ALDH1A1P00352 MIR1244-2-201ENST00000636449 85 ntBASIC6.05□□□□□ -1.44
ALDH1A1P00352 MIR1244-4-202ENST00000636813 85 ntBASIC6.05□□□□□ -1.44
ALDH1A1P00352 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
ALDH1A1P00352 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ALDH1A1P00352 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
ALDH1A1P00352 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ALDH1A1P00352 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ALDH1A1P00352 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC6.04□□□□□ -1.44
ALDH1A1P00352 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.04□□□□□ -1.44
ALDH1A1P00352 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.04□□□□□ -1.44
ALDH1A1P00352 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ALDH1A1P00352 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
ALDH1A1P00352 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC6.04□□□□□ -1.44
ALDH1A1P00352 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ALDH1A1P00352 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
ALDH1A1P00352 XIAPP3-201ENST00000312918 795 ntBASIC6.04□□□□□ -1.44
ALDH1A1P00352 AC138393.1-203ENST00000327086 343 ntBASIC6.04□□□□□ -1.44
ALDH1A1P00352 RN7SKP227-201ENST00000364445 330 ntBASIC6.04□□□□□ -1.44
ALDH1A1P00352 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ALDH1A1P00352 MIR23A-201ENST00000385245 73 ntBASIC6.04□□□□□ -1.44
ALDH1A1P00352 EI24P4-201ENST00000423683 1078 ntBASIC6.04□□□□□ -1.44
ALDH1A1P00352 AC022022.1-201ENST00000430304 178 ntBASIC6.04□□□□□ -1.44
ALDH1A1P00352 AC091286.1-201ENST00000431233 461 ntBASIC6.04□□□□□ -1.44
ALDH1A1P00352 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.04□□□□□ -1.44
ALDH1A1P00352 RPS29P10-201ENST00000439197 166 ntBASIC6.04□□□□□ -1.44
ALDH1A1P00352 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.04□□□□□ -1.44
ALDH1A1P00352 RPS26P56-201ENST00000444468 240 ntBASIC6.04□□□□□ -1.44
ALDH1A1P00352 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.04□□□□□ -1.44
ALDH1A1P00352 RN7SL188P-201ENST00000469842 285 ntBASIC6.04□□□□□ -1.44
ALDH1A1P00352 Y_RNA.687-201ENST00000516558 91 ntBASIC6.04□□□□□ -1.44
ALDH1A1P00352 Y_RNA.713-201ENST00000517013 96 ntBASIC6.04□□□□□ -1.44
ALDH1A1P00352 MTND5P41-201ENST00000517498 206 ntBASIC6.04□□□□□ -1.44
ALDH1A1P00352 AC122688.1-201ENST00000541494 223 ntBASIC6.04□□□□□ -1.44
ALDH1A1P00352 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC6.04□□□□□ -1.44
ALDH1A1P00352 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
ALDH1A1P00352 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC6.04□□□□□ -1.44
ALDH1A1P00352 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC6.04□□□□□ -1.44
ALDH1A1P00352 AL162431.4-201ENST00000604674 411 ntBASIC6.04□□□□□ -1.44
ALDH1A1P00352 DLEU1_1.1-201ENST00000618107 190 ntBASIC6.04□□□□□ -1.44
ALDH1A1P00352 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.04□□□□□ -1.44
ALDH1A1P00352 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
ALDH1A1P00352 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ALDH1A1P00352 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.04□□□□□ -1.44
ALDH1A1P00352 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ALDH1A1P00352 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6.04□□□□□ -1.44
ALDH1A1P00352 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
ALDH1A1P00352 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.04□□□□□ -1.44
ALDH1A1P00352 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
ALDH1A1P00352 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ALDH1A1P00352 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
ALDH1A1P00352 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.03□□□□□ -1.44
ALDH1A1P00352 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
ALDH1A1P00352 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.03□□□□□ -1.44
ALDH1A1P00352 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.03□□□□□ -1.44
ALDH1A1P00352 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ALDH1A1P00352 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
ALDH1A1P00352 RNU1-76P-201ENST00000362903 159 ntBASIC6.03□□□□□ -1.44
ALDH1A1P00352 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
ALDH1A1P00352 SNORA70H-201ENST00000383910 135 ntBASIC6.03□□□□□ -1.44
ALDH1A1P00352 SNORA70J-201ENST00000384182 135 ntBASIC6.03□□□□□ -1.44
ALDH1A1P00352 SNORD115-46-201ENST00000390982 71 ntBASIC6.03□□□□□ -1.44
ALDH1A1P00352 RPS12P5-201ENST00000423449 371 ntBASIC6.03□□□□□ -1.44
ALDH1A1P00352 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC6.03□□□□□ -1.44
ALDH1A1P00352 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.03□□□□□ -1.44
ALDH1A1P00352 RPL21P104-201ENST00000464143 478 ntBASIC6.03□□□□□ -1.44
ALDH1A1P00352 RN7SL817P-201ENST00000480777 288 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms