Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.32□□□□□ -1.56
RAPGEF3O95398 AC007684.1-201ENST00000609671 477 ntBASIC5.32□□□□□ -1.56
RAPGEF3O95398 MIR7106-201ENST00000612419 65 ntBASIC5.32□□□□□ -1.56
RAPGEF3O95398 UBE2Q2P2-203ENST00000613592 761 ntBASIC5.32□□□□□ -1.56
RAPGEF3O95398 WT1-AS_8.1-201ENST00000615200 275 ntBASIC5.32□□□□□ -1.56
RAPGEF3O95398 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.32□□□□□ -1.56
RAPGEF3O95398 OR5AK4P-201ENST00000635912 903 ntBASIC5.32□□□□□ -1.56
RAPGEF3O95398 FARSBP1-201ENST00000435808 1778 ntBASIC5.32□□□□□ -1.56
RAPGEF3O95398 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.31□□□□□ -1.56
RAPGEF3O95398 AC012020.1-201ENST00000624541 1728 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.31□□□□□ -1.56
RAPGEF3O95398 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAPGEF3O95398 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAPGEF3O95398 SNORA5B-201ENST00000363786 132 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 SNORA48.8-201ENST00000391324 134 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 SLC9B1P2-201ENST00000398120 1184 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 C1DP2-201ENST00000418167 426 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 AL590233.1-201ENST00000430017 456 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 AC006028.1-201ENST00000438379 402 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 RPL22P17-201ENST00000438729 315 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 SDCBPP1-201ENST00000440192 890 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 AC069285.2-201ENST00000440210 275 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.31□□□□□ -1.56
RAPGEF3O95398 AC099563.1-201ENST00000456086 418 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC5.31□□□□□ -1.56
RAPGEF3O95398 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RAPGEF3O95398 KC877373.1-201ENST00000479066 408 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 HMGB1P36-201ENST00000487709 576 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 AC091133.4-201ENST00000511142 308 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.31□□□□□ -1.56
RAPGEF3O95398 SNORA18.6-201ENST00000516792 115 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RAPGEF3O95398 VN1R79P-201ENST00000593540 513 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 AC233280.2-201ENST00000603917 1070 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 SNORD91B-202ENST00000608459 222 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 AC013412.1-201ENST00000610687 192 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.31□□□□□ -1.56
RAPGEF3O95398 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.31□□□□□ -1.56
RAPGEF3O95398 AC099654.13-201ENST00000639774 207 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAPGEF3O95398 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.31□□□□□ -1.56
RAPGEF3O95398 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RAPGEF3O95398 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAPGEF3O95398 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 Z73965.1-201ENST00000623412 2297 ntBASIC5.31□□□□□ -1.56
RAPGEF3O95398 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAPGEF3O95398 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RAPGEF3O95398 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RAPGEF3O95398 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RAPGEF3O95398 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.3□□□□□ -1.56
RAPGEF3O95398 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RAPGEF3O95398 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC5.3□□□□□ -1.56
RAPGEF3O95398 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RAPGEF3O95398 OR4G2P-201ENST00000328113 903 ntBASIC5.3□□□□□ -1.56
RAPGEF3O95398 FRG1CP-201ENST00000358464 769 ntBASIC5.3□□□□□ -1.56
RAPGEF3O95398 RN7SKP226-201ENST00000364912 300 ntBASIC5.3□□□□□ -1.56
RAPGEF3O95398 RNU6-730P-201ENST00000383954 104 ntBASIC5.3□□□□□ -1.56
RAPGEF3O95398 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RAPGEF3O95398 MIR1271-201ENST00000408537 86 ntBASIC5.3□□□□□ -1.56
RAPGEF3O95398 ERMN-204ENST00000409925 556 ntTSL 4 BASIC5.3□□□□□ -1.56
RAPGEF3O95398 AL035410.1-201ENST00000427409 427 ntBASIC5.3□□□□□ -1.56
RAPGEF3O95398 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC5.3□□□□□ -1.56
RAPGEF3O95398 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.3□□□□□ -1.56
RAPGEF3O95398 HLA-N-201ENST00000437516 135 ntBASIC5.3□□□□□ -1.56
RAPGEF3O95398 FAM103A2P-201ENST00000444122 354 ntBASIC5.3□□□□□ -1.56
RAPGEF3O95398 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.3□□□□□ -1.56
RAPGEF3O95398 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.3□□□□□ -1.56
RAPGEF3O95398 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC5.3□□□□□ -1.56
RAPGEF3O95398 AC017037.1-201ENST00000508460 471 ntBASIC5.3□□□□□ -1.56
RAPGEF3O95398 AC022483.1-201ENST00000514020 567 ntBASIC5.3□□□□□ -1.56
RAPGEF3O95398 RNU6-430P-201ENST00000517078 107 ntBASIC5.3□□□□□ -1.56
RAPGEF3O95398 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC5.3□□□□□ -1.56
RAPGEF3O95398 AC135001.1-201ENST00000544546 283 ntBASIC5.3□□□□□ -1.56
RAPGEF3O95398 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.3□□□□□ -1.56
RAPGEF3O95398 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC5.3□□□□□ -1.56
RAPGEF3O95398 HNRNPDLP4-201ENST00000605144 301 ntBASIC5.3□□□□□ -1.56
RAPGEF3O95398 AC113194.1-201ENST00000606037 500 ntBASIC5.3□□□□□ -1.56
RAPGEF3O95398 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
RAPGEF3O95398 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RAPGEF3O95398 AL356274.2-201ENST00000624379 3752 ntBASIC5.3□□□□□ -1.56
RAPGEF3O95398 AC126323.6-202ENST00000568092 3511 ntBASIC5.3□□□□□ -1.56
RAPGEF3O95398 KPNA2P2-201ENST00000419546 1489 ntBASIC5.3□□□□□ -1.56
RAPGEF3O95398 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RAPGEF3O95398 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
RAPGEF3O95398 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RAPGEF3O95398 AC000123.3-201ENST00000624029 4975 ntBASIC5.29□□□□□ -1.56
RAPGEF3O95398 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
RAPGEF3O95398 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RAPGEF3O95398 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
RAPGEF3O95398 MIR422A-201ENST00000362286 90 ntBASIC5.29□□□□□ -1.56
RAPGEF3O95398 SNORD82-201ENST00000365530 70 ntBASIC5.29□□□□□ -1.56
RAPGEF3O95398 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC5.29□□□□□ -1.56
RAPGEF3O95398 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.29□□□□□ -1.56
RAPGEF3O95398 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.29□□□□□ -1.56
RAPGEF3O95398 NDUFB1P1-201ENST00000435191 180 ntBASIC5.29□□□□□ -1.56
RAPGEF3O95398 AC107083.1-201ENST00000439643 279 ntBASIC5.29□□□□□ -1.56
RAPGEF3O95398 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.29□□□□□ -1.56
RAPGEF3O95398 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms