Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 NPM1P10-201ENST00000398310 865 ntBASIC2.54□□□□□ -2
VAPBO95292 AL035405.1-201ENST00000400795 710 ntBASIC2.54□□□□□ -2
VAPBO95292 MTND3P20-201ENST00000407663 186 ntBASIC2.54□□□□□ -2
VAPBO95292 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.54□□□□□ -2
VAPBO95292 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.54□□□□□ -2
VAPBO95292 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC2.54□□□□□ -2
VAPBO95292 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.54□□□□□ -2
VAPBO95292 AC234781.2-201ENST00000426370 994 ntBASIC2.54□□□□□ -2
VAPBO95292 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.54□□□□□ -2
VAPBO95292 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.54□□□□□ -2
VAPBO95292 ARL5AP4-201ENST00000430731 512 ntBASIC2.54□□□□□ -2
VAPBO95292 LSM1P1-201ENST00000438629 273 ntBASIC2.54□□□□□ -2
VAPBO95292 AC133134.1-201ENST00000466800 359 ntBASIC2.54□□□□□ -2
VAPBO95292 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.54□□□□□ -2
VAPBO95292 AIG1P1-201ENST00000503376 148 ntBASIC2.54□□□□□ -2
VAPBO95292 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.54□□□□□ -2
VAPBO95292 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.54□□□□□ -2
VAPBO95292 AC112518.2-201ENST00000508565 425 ntBASIC2.54□□□□□ -2
VAPBO95292 MTCO1P47-201ENST00000523889 1271 ntBASIC2.54□□□□□ -2
VAPBO95292 DEFB108D-201ENST00000527787 222 ntBASIC2.54□□□□□ -2
VAPBO95292 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.54□□□□□ -2
VAPBO95292 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.54□□□□□ -2
VAPBO95292 MIR3921-201ENST00000577308 85 ntBASIC2.54□□□□□ -2
VAPBO95292 RN7SL622P-201ENST00000585292 275 ntBASIC2.54□□□□□ -2
VAPBO95292 VN1R92P-201ENST00000598511 928 ntBASIC2.54□□□□□ -2
VAPBO95292 AP002906.1-201ENST00000603405 233 ntBASIC2.54□□□□□ -2
VAPBO95292 AL136363.1-201ENST00000605349 337 ntBASIC2.54□□□□□ -2
VAPBO95292 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
VAPBO95292 AL121594.5-201ENST00000631724 573 ntBASIC2.54□□□□□ -2
VAPBO95292 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.54□□□□□ -2
VAPBO95292 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.54□□□□□ -2
VAPBO95292 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VAPBO95292 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
VAPBO95292 ZNF849P-201ENST00000594711 1566 ntBASIC2.53□□□□□ -2
VAPBO95292 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
VAPBO95292 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.53□□□□□ -2
VAPBO95292 OR4G11P-202ENST00000642116 1414 ntBASIC2.53□□□□□ -2
VAPBO95292 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.53□□□□□ -2
VAPBO95292 RNU6-198P-201ENST00000384258 104 ntBASIC2.53□□□□□ -2
VAPBO95292 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.53□□□□□ -2
VAPBO95292 AC096664.2-201ENST00000411843 406 ntBASIC2.53□□□□□ -2
VAPBO95292 HMGN2P35-201ENST00000412164 270 ntBASIC2.53□□□□□ -2
VAPBO95292 AL136133.1-201ENST00000413694 376 ntBASIC2.53□□□□□ -2
VAPBO95292 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.53□□□□□ -2
VAPBO95292 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.53□□□□□ -2
VAPBO95292 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.53□□□□□ -2
VAPBO95292 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.53□□□□□ -2
VAPBO95292 ARPC3P1-201ENST00000437218 533 ntBASIC2.53□□□□□ -2
VAPBO95292 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.53□□□□□ -2
VAPBO95292 MTND2P3-201ENST00000452458 470 ntBASIC2.53□□□□□ -2
VAPBO95292 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.53□□□□□ -2
VAPBO95292 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.53□□□□□ -2
VAPBO95292 RPL31P60-201ENST00000478450 367 ntBASIC2.53□□□□□ -2
VAPBO95292 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.53□□□□□ -2
VAPBO95292 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.53□□□□□ -2
VAPBO95292 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.53□□□□□ -2
VAPBO95292 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.53□□□□□ -2
VAPBO95292 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.53□□□□□ -2
VAPBO95292 AP001317.1-201ENST00000531194 960 ntBASIC2.53□□□□□ -2
VAPBO95292 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.53□□□□□ -2
VAPBO95292 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC2.53□□□□□ -2
VAPBO95292 LARP7P3-201ENST00000579888 337 ntBASIC2.53□□□□□ -2
VAPBO95292 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.53□□□□□ -2
VAPBO95292 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.53□□□□□ -2
VAPBO95292 RPL23AP92-201ENST00000603609 255 ntBASIC2.53□□□□□ -2
VAPBO95292 DUXAP3-201ENST00000603616 594 ntBASIC2.53□□□□□ -2
VAPBO95292 AL035413.2-201ENST00000604801 525 ntBASIC2.53□□□□□ -2
VAPBO95292 AC008669.1-201ENST00000565823 2178 ntBASIC2.53□□□□□ -2
VAPBO95292 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.53□□□□□ -2
VAPBO95292 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
VAPBO95292 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
VAPBO95292 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.52□□□□□ -2.01
VAPBO95292 MIR34A-201ENST00000385130 110 ntBASIC2.52□□□□□ -2.01
VAPBO95292 AL133264.1-201ENST00000407157 562 ntBASIC2.52□□□□□ -2.01
VAPBO95292 RNA5SP181-201ENST00000410246 98 ntBASIC2.52□□□□□ -2.01
VAPBO95292 RNU2-25P-201ENST00000411041 191 ntBASIC2.52□□□□□ -2.01
VAPBO95292 AC092638.1-201ENST00000411966 1275 ntBASIC2.52□□□□□ -2.01
VAPBO95292 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.52□□□□□ -2.01
VAPBO95292 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.52□□□□□ -2.01
VAPBO95292 RSL24D1P8-201ENST00000434442 492 ntBASIC2.52□□□□□ -2.01
VAPBO95292 AC024082.2-201ENST00000434771 238 ntBASIC2.52□□□□□ -2.01
VAPBO95292 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.52□□□□□ -2.01
VAPBO95292 MTCO3P43-201ENST00000440974 771 ntBASIC2.52□□□□□ -2.01
VAPBO95292 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.52□□□□□ -2.01
VAPBO95292 RNU7-140P-201ENST00000459546 60 ntBASIC2.52□□□□□ -2.01
VAPBO95292 OR52A4P-202ENST00000481634 799 ntBASIC2.52□□□□□ -2.01
VAPBO95292 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.52□□□□□ -2.01
VAPBO95292 SNORA31.15-201ENST00000516771 132 ntBASIC2.52□□□□□ -2.01
VAPBO95292 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.52□□□□□ -2.01
VAPBO95292 EIF4BP1-201ENST00000554881 351 ntBASIC2.52□□□□□ -2.01
VAPBO95292 HMGB1P14-201ENST00000557424 591 ntBASIC2.52□□□□□ -2.01
VAPBO95292 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.52□□□□□ -2.01
VAPBO95292 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.52□□□□□ -2.01
VAPBO95292 AC015688.2-201ENST00000584523 262 ntBASIC2.52□□□□□ -2.01
VAPBO95292 MIR7106-201ENST00000612419 65 ntBASIC2.52□□□□□ -2.01
VAPBO95292 AC004852.3-201ENST00000614131 326 ntBASIC2.52□□□□□ -2.01
VAPBO95292 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.52□□□□□ -2.01
VAPBO95292 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
VAPBO95292 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VAPBO95292 AL365361.1-201ENST00000566942 3481 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms