Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
NKX2-2O95096 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
NKX2-2O95096 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.5□□□□□ -1.85
NKX2-2O95096 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NKX2-2O95096 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NKX2-2O95096 DEFB108F-201ENST00000344638 222 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 SNORA23-201ENST00000365128 182 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 Y_RNA.318-201ENST00000365131 97 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 RNA5SP129-201ENST00000410276 118 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 SPA17P1-201ENST00000416656 452 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.5□□□□□ -1.85
NKX2-2O95096 CYCSP43-201ENST00000438233 310 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.5□□□□□ -1.85
NKX2-2O95096 AL031667.1-201ENST00000440222 725 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 MTND1P12-201ENST00000455231 147 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 RN7SL93P-201ENST00000463035 293 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NKX2-2O95096 RPS15AP36-201ENST00000492022 382 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 MTCO2P32-201ENST00000514865 403 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
NKX2-2O95096 Y_RNA.672-201ENST00000516289 104 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 RNA5SP143-201ENST00000516936 115 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 IGKV2D-23-201ENST00000518179 286 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NKX2-2O95096 AC107016.1-201ENST00000550463 337 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.5□□□□□ -1.85
NKX2-2O95096 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.5□□□□□ -1.85
NKX2-2O95096 ZNF192P1-203ENST00000565888 810 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 RN7SL703P-201ENST00000578485 302 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 MIR4697-201ENST00000582977 78 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 AC105224.1-201ENST00000587055 421 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 AP001029.3-201ENST00000588063 596 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.5□□□□□ -1.85
NKX2-2O95096 BRDTP1-201ENST00000605735 677 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 AC090425.2-201ENST00000608818 501 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 AC100793.4-201ENST00000613683 429 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 AC008250.2-201ENST00000615261 205 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 AC092656.1-203ENST00000624134 423 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 AC004777.1-201ENST00000624317 287 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 AC068724.3-201ENST00000625906 87 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.5□□□□□ -1.85
NKX2-2O95096 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.5□□□□□ -1.85
NKX2-2O95096 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
NKX2-2O95096 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.5□□□□□ -1.85
NKX2-2O95096 AC092104.1-201ENST00000497346 1441 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.5□□□□□ -1.85
NKX2-2O95096 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NKX2-2O95096 AC106871.1-201ENST00000568324 3102 ntBASIC3.5□□□□□ -1.85
NKX2-2O95096 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 SDAD1P2-201ENST00000441308 2028 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
NKX2-2O95096 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.49□□□□□ -1.85
NKX2-2O95096 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NKX2-2O95096 RNU6-50P-201ENST00000362356 103 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 RN7SKP227-201ENST00000364445 330 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
NKX2-2O95096 DEFB109C-201ENST00000382575 264 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 DEFB109B-201ENST00000382656 264 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 Y_RNA.436-201ENST00000384097 102 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 SNORA36C-201ENST00000384289 132 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 RNU6-348P-201ENST00000384386 107 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 HSPE1P8-201ENST00000406997 288 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.49□□□□□ -1.85
NKX2-2O95096 RPL21P109-201ENST00000422213 475 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.49□□□□□ -1.85
NKX2-2O95096 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX2-2O95096 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.49□□□□□ -1.85
NKX2-2O95096 AC005094.1-201ENST00000440420 368 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 MTCO3P45-201ENST00000443036 613 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 MTCO2P7-201ENST00000446518 666 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 ELOCP30-201ENST00000447108 299 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.49□□□□□ -1.85
NKX2-2O95096 MTND1P27-201ENST00000451117 902 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX2-2O95096 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX2-2O95096 MTND3P5-201ENST00000512798 333 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX2-2O95096 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.49□□□□□ -1.85
NKX2-2O95096 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX2-2O95096 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.49□□□□□ -1.85
NKX2-2O95096 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX2-2O95096 AC006960.3-201ENST00000561845 705 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.49□□□□□ -1.85
NKX2-2O95096 MIR3921-201ENST00000577308 85 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 MIR3160-1-201ENST00000577972 85 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.49□□□□□ -1.85
NKX2-2O95096 MIR3611-201ENST00000584484 83 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.49□□□□□ -1.85
NKX2-2O95096 AC040904.1-201ENST00000590850 223 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 AL606834.2-201ENST00000602954 668 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 AL451064.1-201ENST00000607718 471 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 AC109347.2-201ENST00000610220 349 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.49□□□□□ -1.85
NKX2-2O95096 AL359715.5-201ENST00000623431 443 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 AC095031.1-201ENST00000623685 672 ntBASIC3.49□□□□□ -1.85
NKX2-2O95096 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.49□□□□□ -1.85
NKX2-2O95096 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.49□□□□□ -1.85
NKX2-2O95096 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.49□□□□□ -1.85
NKX2-2O95096 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
NKX2-2O95096 AL672296.1-201ENST00000427780 2158 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms