Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC080125.1-201ENST00000414888 684 ntBASIC2.55□□□□□ -2
SHOX2O60902 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.55□□□□□ -2
SHOX2O60902 USP9YP20-201ENST00000419224 558 ntBASIC2.55□□□□□ -2
SHOX2O60902 HMGN2P30-201ENST00000423237 256 ntBASIC2.55□□□□□ -2
SHOX2O60902 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.55□□□□□ -2
SHOX2O60902 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.55□□□□□ -2
SHOX2O60902 RPS20P5-201ENST00000434808 360 ntBASIC2.55□□□□□ -2
SHOX2O60902 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.55□□□□□ -2
SHOX2O60902 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.55□□□□□ -2
SHOX2O60902 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.55□□□□□ -2
SHOX2O60902 AC112492.1-201ENST00000449607 712 ntBASIC2.55□□□□□ -2
SHOX2O60902 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.55□□□□□ -2
SHOX2O60902 MTCO3P2-201ENST00000457365 171 ntBASIC2.55□□□□□ -2
SHOX2O60902 AL031183.1-201ENST00000457667 207 ntBASIC2.55□□□□□ -2
SHOX2O60902 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.55□□□□□ -2
SHOX2O60902 snoU13.26-201ENST00000459452 105 ntBASIC2.55□□□□□ -2
SHOX2O60902 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.55□□□□□ -2
SHOX2O60902 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.55□□□□□ -2
SHOX2O60902 NUP58P1-201ENST00000502546 1738 ntBASIC2.55□□□□□ -2
SHOX2O60902 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.55□□□□□ -2
SHOX2O60902 SNORA48.9-201ENST00000516419 162 ntBASIC2.55□□□□□ -2
SHOX2O60902 IGLV3-17-201ENST00000519099 244 ntBASIC2.55□□□□□ -2
SHOX2O60902 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.55□□□□□ -2
SHOX2O60902 NBEAP1-201ENST00000554452 979 ntBASIC2.55□□□□□ -2
SHOX2O60902 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.55□□□□□ -2
SHOX2O60902 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.55□□□□□ -2
SHOX2O60902 BNIP3P8-201ENST00000597863 560 ntBASIC2.55□□□□□ -2
SHOX2O60902 SGO1P1-201ENST00000603525 1447 ntBASIC2.55□□□□□ -2
SHOX2O60902 AC011460.1-201ENST00000636268 1834 ntBASIC2.55□□□□□ -2
SHOX2O60902 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.55□□□□□ -2
SHOX2O60902 AC000403.1-201ENST00000613696 3585 ntBASIC2.55□□□□□ -2
SHOX2O60902 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
SHOX2O60902 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.54□□□□□ -2
SHOX2O60902 MTCO1P9-201ENST00000505577 1534 ntBASIC2.54□□□□□ -2
SHOX2O60902 AL513185.3-201ENST00000433335 1300 ntBASIC2.54□□□□□ -2
SHOX2O60902 RPL21P132-201ENST00000331267 462 ntBASIC2.54□□□□□ -2
SHOX2O60902 MIR21-201ENST00000362134 72 ntBASIC2.54□□□□□ -2
SHOX2O60902 RNU6-482P-201ENST00000391068 107 ntBASIC2.54□□□□□ -2
SHOX2O60902 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.54□□□□□ -2
SHOX2O60902 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.54□□□□□ -2
SHOX2O60902 AC008173.1-201ENST00000418901 264 ntBASIC2.54□□□□□ -2
SHOX2O60902 TMEM167AP1-201ENST00000423409 219 ntBASIC2.54□□□□□ -2
SHOX2O60902 MTCO2P17-201ENST00000424336 677 ntBASIC2.54□□□□□ -2
SHOX2O60902 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.54□□□□□ -2
SHOX2O60902 AC079780.1-201ENST00000428259 207 ntBASIC2.54□□□□□ -2
SHOX2O60902 ZFAND6P1-201ENST00000434138 605 ntBASIC2.54□□□□□ -2
SHOX2O60902 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.54□□□□□ -2
SHOX2O60902 RNFT1P2-201ENST00000443064 757 ntBASIC2.54□□□□□ -2
SHOX2O60902 snoU13.23-201ENST00000458863 104 ntBASIC2.54□□□□□ -2
SHOX2O60902 TRBV12-1-201ENST00000479785 344 ntBASIC2.54□□□□□ -2
SHOX2O60902 AC112673.1-201ENST00000513168 575 ntBASIC2.54□□□□□ -2
SHOX2O60902 SNORA76.2-201ENST00000517095 137 ntBASIC2.54□□□□□ -2
SHOX2O60902 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.54□□□□□ -2
SHOX2O60902 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.54□□□□□ -2
SHOX2O60902 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.54□□□□□ -2
SHOX2O60902 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.54□□□□□ -2
SHOX2O60902 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.54□□□□□ -2
SHOX2O60902 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.54□□□□□ -2
SHOX2O60902 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.54□□□□□ -2
SHOX2O60902 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.54□□□□□ -2
SHOX2O60902 GLUD1P4-201ENST00000590914 418 ntBASIC2.54□□□□□ -2
SHOX2O60902 AC106900.2-201ENST00000604994 317 ntBASIC2.54□□□□□ -2
SHOX2O60902 AL133507.1-201ENST00000605269 557 ntBASIC2.54□□□□□ -2
SHOX2O60902 AC245100.7-201ENST00000609678 442 ntBASIC2.54□□□□□ -2
SHOX2O60902 AP003485.2-201ENST00000623636 610 ntBASIC2.54□□□□□ -2
SHOX2O60902 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.54□□□□□ -2
SHOX2O60902 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.54□□□□□ -2
SHOX2O60902 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.54□□□□□ -2
SHOX2O60902 Z82195.2-201ENST00000612348 18351 ntBASIC2.54□□□□□ -2
SHOX2O60902 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.54□□□□□ -2
SHOX2O60902 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.54□□□□□ -2
SHOX2O60902 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SHOX2O60902 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.53□□□□□ -2
SHOX2O60902 CKAP2P1-201ENST00000555477 2049 ntBASIC2.53□□□□□ -2
SHOX2O60902 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.53□□□□□ -2
SHOX2O60902 RNU4-82P-201ENST00000362443 140 ntBASIC2.53□□□□□ -2
SHOX2O60902 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
SHOX2O60902 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
SHOX2O60902 SNORA18.3-201ENST00000384122 132 ntBASIC2.53□□□□□ -2
SHOX2O60902 SNORA70B-201ENST00000384210 135 ntBASIC2.53□□□□□ -2
SHOX2O60902 ANAPC10P1-201ENST00000395991 556 ntBASIC2.53□□□□□ -2
SHOX2O60902 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.53□□□□□ -2
SHOX2O60902 AL513477.1-202ENST00000417061 214 ntBASIC2.53□□□□□ -2
SHOX2O60902 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.53□□□□□ -2
SHOX2O60902 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.53□□□□□ -2
SHOX2O60902 AC004866.2-201ENST00000438285 481 ntBASIC2.53□□□□□ -2
SHOX2O60902 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.53□□□□□ -2
SHOX2O60902 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.53□□□□□ -2
SHOX2O60902 RPL21P47-201ENST00000483696 477 ntBASIC2.53□□□□□ -2
SHOX2O60902 AC083906.5-201ENST00000503722 328 ntBASIC2.53□□□□□ -2
SHOX2O60902 SEM1P1-201ENST00000506694 209 ntBASIC2.53□□□□□ -2
SHOX2O60902 RNU6-991P-201ENST00000516168 107 ntBASIC2.53□□□□□ -2
SHOX2O60902 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SHOX2O60902 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.53□□□□□ -2
SHOX2O60902 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.53□□□□□ -2
SHOX2O60902 AC125611.2-201ENST00000551907 647 ntBASIC2.53□□□□□ -2
SHOX2O60902 AC091544.4-201ENST00000555268 342 ntBASIC2.53□□□□□ -2
SHOX2O60902 MED28P6-201ENST00000558776 231 ntBASIC2.53□□□□□ -2
SHOX2O60902 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.53□□□□□ -2
SHOX2O60902 AC019159.1-201ENST00000605094 187 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms