Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC008088.1-201ENST00000580993 280 ntBASIC3.25□□□□□ -1.89
SNX3O60493 AC060771.1-201ENST00000582031 164 ntBASIC3.25□□□□□ -1.89
SNX3O60493 BDH2P1-201ENST00000602288 736 ntBASIC3.25□□□□□ -1.89
SNX3O60493 AC091965.4-201ENST00000607691 587 ntBASIC3.25□□□□□ -1.89
SNX3O60493 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.25□□□□□ -1.89
SNX3O60493 AC012531.5-201ENST00000611375 151 ntBASIC3.25□□□□□ -1.89
SNX3O60493 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
SNX3O60493 AC091931.1-201ENST00000623488 728 ntBASIC3.25□□□□□ -1.89
SNX3O60493 AC091903.1-201ENST00000624322 454 ntBASIC3.25□□□□□ -1.89
SNX3O60493 AC119674.1-207ENST00000641355 633 ntBASIC3.25□□□□□ -1.89
SNX3O60493 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.25□□□□□ -1.89
SNX3O60493 AC009812.4-201ENST00000569134 1805 ntBASIC3.25□□□□□ -1.89
SNX3O60493 PABPC1P9-201ENST00000426076 1612 ntBASIC3.25□□□□□ -1.89
SNX3O60493 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNX3O60493 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNX3O60493 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SNX3O60493 MTND5P33-201ENST00000571250 1450 ntBASIC3.24□□□□□ -1.89
SNX3O60493 AC092125.1-201ENST00000562568 1995 ntBASIC3.24□□□□□ -1.89
SNX3O60493 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SNX3O60493 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SNX3O60493 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SNX3O60493 RNU6-50P-201ENST00000362356 103 ntBASIC3.24□□□□□ -1.89
SNX3O60493 RNU1-70P-201ENST00000362618 164 ntBASIC3.24□□□□□ -1.89
SNX3O60493 SNORA62-201ENST00000365493 153 ntBASIC3.24□□□□□ -1.89
SNX3O60493 RNA5SP229-201ENST00000410809 99 ntBASIC3.24□□□□□ -1.89
SNX3O60493 RPL7P8-201ENST00000411964 730 ntBASIC3.24□□□□□ -1.89
SNX3O60493 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.24□□□□□ -1.89
SNX3O60493 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.24□□□□□ -1.89
SNX3O60493 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.24□□□□□ -1.89
SNX3O60493 AC024082.2-201ENST00000434771 238 ntBASIC3.24□□□□□ -1.89
SNX3O60493 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.24□□□□□ -1.89
SNX3O60493 RPL37P21-201ENST00000435890 276 ntBASIC3.24□□□□□ -1.89
SNX3O60493 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.24□□□□□ -1.89
SNX3O60493 HMGB1P12-201ENST00000438594 598 ntBASIC3.24□□□□□ -1.89
SNX3O60493 UBE2D3P4-201ENST00000441973 436 ntBASIC3.24□□□□□ -1.89
SNX3O60493 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.24□□□□□ -1.89
SNX3O60493 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.24□□□□□ -1.89
SNX3O60493 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SNX3O60493 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.24□□□□□ -1.89
SNX3O60493 CFTRP1-201ENST00000456646 183 ntBASIC3.24□□□□□ -1.89
SNX3O60493 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.24□□□□□ -1.89
SNX3O60493 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.24□□□□□ -1.89
SNX3O60493 CBX3P3-201ENST00000508108 532 ntBASIC3.24□□□□□ -1.89
SNX3O60493 AC026402.1-201ENST00000513642 170 ntBASIC3.24□□□□□ -1.89
SNX3O60493 AC022483.1-201ENST00000514020 567 ntBASIC3.24□□□□□ -1.89
SNX3O60493 AC116347.2-201ENST00000514912 523 ntBASIC3.24□□□□□ -1.89
SNX3O60493 SNORA31.9-201ENST00000516429 84 ntBASIC3.24□□□□□ -1.89
SNX3O60493 MTCO1P47-201ENST00000523889 1271 ntBASIC3.24□□□□□ -1.89
SNX3O60493 SYF2P1-201ENST00000550658 413 ntBASIC3.24□□□□□ -1.89
SNX3O60493 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.24□□□□□ -1.89
SNX3O60493 OR4H12P-201ENST00000556269 907 ntBASIC3.24□□□□□ -1.89
SNX3O60493 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.24□□□□□ -1.89
SNX3O60493 AC091489.2-201ENST00000566263 604 ntBASIC3.24□□□□□ -1.89
SNX3O60493 AC023575.1-201ENST00000580510 358 ntBASIC3.24□□□□□ -1.89
SNX3O60493 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.24□□□□□ -1.89
SNX3O60493 PRELID3BP8-201ENST00000604148 295 ntBASIC3.24□□□□□ -1.89
SNX3O60493 U3.45-201ENST00000607547 219 ntBASIC3.24□□□□□ -1.89
SNX3O60493 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.24□□□□□ -1.89
SNX3O60493 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
SNX3O60493 AC008443.7-201ENST00000622195 246 ntBASIC3.24□□□□□ -1.89
SNX3O60493 AC079597.1-201ENST00000624306 508 ntBASIC3.24□□□□□ -1.89
SNX3O60493 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.24□□□□□ -1.89
SNX3O60493 AC084035.1-201ENST00000634543 607 ntBASIC3.24□□□□□ -1.89
SNX3O60493 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.24□□□□□ -1.89
SNX3O60493 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.24□□□□□ -1.89
SNX3O60493 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.24□□□□□ -1.89
SNX3O60493 AL445523.1-201ENST00000451184 1362 ntBASIC3.24□□□□□ -1.89
SNX3O60493 AC009902.3-201ENST00000606235 2172 ntBASIC3.24□□□□□ -1.89
SNX3O60493 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SNX3O60493 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SNX3O60493 AC011460.1-201ENST00000636268 1834 ntBASIC3.23□□□□□ -1.89
SNX3O60493 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.23□□□□□ -1.89
SNX3O60493 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.23□□□□□ -1.89
SNX3O60493 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SNX3O60493 RNU5F-6P-201ENST00000362979 116 ntBASIC3.23□□□□□ -1.89
SNX3O60493 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.23□□□□□ -1.89
SNX3O60493 RN7SKP111-201ENST00000410349 271 ntBASIC3.23□□□□□ -1.89
SNX3O60493 BMS1P22-201ENST00000414726 313 ntBASIC3.23□□□□□ -1.89
SNX3O60493 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.23□□□□□ -1.89
SNX3O60493 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.23□□□□□ -1.89
SNX3O60493 Z99497.1-201ENST00000421282 135 ntBASIC3.23□□□□□ -1.89
SNX3O60493 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.23□□□□□ -1.89
SNX3O60493 MTATP6P4-201ENST00000427725 675 ntBASIC3.23□□□□□ -1.89
SNX3O60493 AC109583.1-201ENST00000432156 268 ntBASIC3.23□□□□□ -1.89
SNX3O60493 AC090774.1-201ENST00000435925 246 ntBASIC3.23□□□□□ -1.89
SNX3O60493 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.23□□□□□ -1.89
SNX3O60493 CYCSP43-201ENST00000438233 310 ntBASIC3.23□□□□□ -1.89
SNX3O60493 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.23□□□□□ -1.89
SNX3O60493 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SNX3O60493 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.23□□□□□ -1.89
SNX3O60493 MTCO1P42-201ENST00000457379 726 ntBASIC3.23□□□□□ -1.89
SNX3O60493 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.23□□□□□ -1.89
SNX3O60493 SNRPGP3-201ENST00000469405 227 ntBASIC3.23□□□□□ -1.89
SNX3O60493 AC108860.1-201ENST00000484521 383 ntBASIC3.23□□□□□ -1.89
SNX3O60493 AC006499.5-201ENST00000505037 514 ntBASIC3.23□□□□□ -1.89
SNX3O60493 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.23□□□□□ -1.89
SNX3O60493 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.23□□□□□ -1.89
SNX3O60493 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.23□□□□□ -1.89
SNX3O60493 RNA5SP468-201ENST00000516782 93 ntBASIC3.23□□□□□ -1.89
SNX3O60493 AC106038.2-201ENST00000520706 568 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms