Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ZIC3O60481 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ZIC3O60481 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ZIC3O60481 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ZIC3O60481 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.49□□□□□ -1.85
ZIC3O60481 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
ZIC3O60481 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ZIC3O60481 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
ZIC3O60481 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ZIC3O60481 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
ZIC3O60481 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ZIC3O60481 RNU5A-8P-201ENST00000364102 114 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.49□□□□□ -1.85
ZIC3O60481 RNU6-629P-201ENST00000384061 103 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 GSTA9P-201ENST00000406231 611 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 HMGN1P24-201ENST00000412282 298 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 AL137014.1-201ENST00000420490 1226 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 AC099677.1-201ENST00000420575 175 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.49□□□□□ -1.85
ZIC3O60481 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.49□□□□□ -1.85
ZIC3O60481 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.49□□□□□ -1.85
ZIC3O60481 AC122718.1-201ENST00000439448 744 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.49□□□□□ -1.85
ZIC3O60481 MTCO3P20-201ENST00000454926 688 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 MTND1P12-201ENST00000455231 147 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.49□□□□□ -1.85
ZIC3O60481 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.49□□□□□ -1.85
ZIC3O60481 FAM133DP-201ENST00000464802 691 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 AC004924.1-201ENST00000480160 781 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.49□□□□□ -1.85
ZIC3O60481 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.49□□□□□ -1.85
ZIC3O60481 VWA8P1-201ENST00000510889 176 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 AC026726.1-201ENST00000512859 601 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 Vault.3-201ENST00000516676 95 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 RNU6-798P-201ENST00000516912 103 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.49□□□□□ -1.85
ZIC3O60481 MED28P5-201ENST00000528254 438 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 DEFB108A-201ENST00000530110 222 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.49□□□□□ -1.85
ZIC3O60481 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.49□□□□□ -1.85
ZIC3O60481 AC018630.1-201ENST00000541376 925 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.49□□□□□ -1.85
ZIC3O60481 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.49□□□□□ -1.85
ZIC3O60481 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.49□□□□□ -1.85
ZIC3O60481 AC136619.2-201ENST00000563361 631 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.49□□□□□ -1.85
ZIC3O60481 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.49□□□□□ -1.85
ZIC3O60481 KC877982.1-201ENST00000602313 470 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.49□□□□□ -1.85
ZIC3O60481 AC007038.2-201ENST00000608095 740 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 AF250324.2-201ENST00000608299 610 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 AC007684.1-201ENST00000609671 477 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 TUG1_1.1-201ENST00000610654 145 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 AC245517.5-201ENST00000611529 162 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 uc_338.12-201ENST00000616344 181 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 AC004825.2-201ENST00000616634 455 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 MIR4727-201ENST00000622232 55 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 AC124864.2-201ENST00000624736 186 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.49□□□□□ -1.85
ZIC3O60481 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
ZIC3O60481 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.49□□□□□ -1.85
ZIC3O60481 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.49□□□□□ -1.85
ZIC3O60481 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
ZIC3O60481 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
ZIC3O60481 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ZIC3O60481 UBE3AP2-201ENST00000429033 2259 ntBASIC3.49□□□□□ -1.85
ZIC3O60481 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.48□□□□□ -1.85
ZIC3O60481 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ZIC3O60481 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
ZIC3O60481 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
ZIC3O60481 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ZIC3O60481 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
ZIC3O60481 Y_RNA.296-201ENST00000364930 108 ntBASIC3.48□□□□□ -1.85
ZIC3O60481 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.48□□□□□ -1.85
ZIC3O60481 RNU6-1103P-201ENST00000384150 107 ntBASIC3.48□□□□□ -1.85
ZIC3O60481 MIR134-201ENST00000385258 73 ntBASIC3.48□□□□□ -1.85
ZIC3O60481 RNU6-754P-201ENST00000391166 107 ntBASIC3.48□□□□□ -1.85
ZIC3O60481 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
ZIC3O60481 RN7SKP202-201ENST00000410439 330 ntBASIC3.48□□□□□ -1.85
ZIC3O60481 RNA5SP39-201ENST00000411245 120 ntBASIC3.48□□□□□ -1.85
ZIC3O60481 AC127391.1-201ENST00000411737 98 ntBASIC3.48□□□□□ -1.85
ZIC3O60481 RAD23BP2-201ENST00000416003 1207 ntBASIC3.48□□□□□ -1.85
ZIC3O60481 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.48□□□□□ -1.85
ZIC3O60481 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.48□□□□□ -1.85
ZIC3O60481 USP9YP15-201ENST00000442391 422 ntBASIC3.48□□□□□ -1.85
ZIC3O60481 HMGN2P21-201ENST00000447764 270 ntBASIC3.48□□□□□ -1.85
ZIC3O60481 C1DP4-201ENST00000455429 424 ntBASIC3.48□□□□□ -1.85
ZIC3O60481 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.48□□□□□ -1.85
ZIC3O60481 MTCO2P29-201ENST00000465212 189 ntBASIC3.48□□□□□ -1.85
ZIC3O60481 AC126182.1-201ENST00000478134 357 ntBASIC3.48□□□□□ -1.85
ZIC3O60481 AP000926.1-201ENST00000479573 241 ntBASIC3.48□□□□□ -1.85
ZIC3O60481 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.48□□□□□ -1.85
ZIC3O60481 AC146944.2-203ENST00000502493 354 ntBASIC3.48□□□□□ -1.85
ZIC3O60481 HMGB1P29-201ENST00000505659 499 ntBASIC3.48□□□□□ -1.85
ZIC3O60481 AC139495.1-202ENST00000513164 354 ntBASIC3.48□□□□□ -1.85
ZIC3O60481 RNA5SP337-201ENST00000517007 109 ntBASIC3.48□□□□□ -1.85
ZIC3O60481 AC103783.1-201ENST00000520506 373 ntBASIC3.48□□□□□ -1.85
ZIC3O60481 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.48□□□□□ -1.85
ZIC3O60481 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.48□□□□□ -1.85
ZIC3O60481 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms