Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 AC104010.1-201ENST00000616889 150 ntBASIC3.8□□□□□ -1.8
SLC28A2O43868 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.8□□□□□ -1.8
SLC28A2O43868 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC28A2O43868 AL139089.1-201ENST00000620372 975 ntBASIC3.8□□□□□ -1.8
SLC28A2O43868 AC231657.1-201ENST00000624313 397 ntBASIC3.8□□□□□ -1.8
SLC28A2O43868 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
SLC28A2O43868 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
SLC28A2O43868 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC28A2O43868 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.8□□□□□ -1.8
SLC28A2O43868 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.8□□□□□ -1.8
SLC28A2O43868 MTND5P28-201ENST00000438005 1594 ntBASIC3.8□□□□□ -1.8
SLC28A2O43868 SAGE4P-201ENST00000442271 3381 ntBASIC3.8□□□□□ -1.8
SLC28A2O43868 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC28A2O43868 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC28A2O43868 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC28A2O43868 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC28A2O43868 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC28A2O43868 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SLC28A2O43868 AC007685.1-201ENST00000329806 452 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 SNRPEP3-201ENST00000338402 276 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 Y_RNA.38-201ENST00000362617 102 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 RNU6-1243P-201ENST00000364028 107 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 MIR649-201ENST00000384843 97 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 MIR30B-201ENST00000384850 88 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 MT-TL1-201ENST00000386347 75 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SLC28A2O43868 RNU6-780P-201ENST00000391030 104 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 MIR1251-201ENST00000408552 70 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 RPS3AP3-201ENST00000411933 242 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 C1DP2-201ENST00000418167 426 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 AC083875.1-201ENST00000419509 405 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 RPL7P30-201ENST00000420888 709 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC28A2O43868 AL358472.1-201ENST00000431295 329 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 AC087650.1-201ENST00000431445 468 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.79□□□□□ -1.8
SLC28A2O43868 AL356535.1-201ENST00000440335 398 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 RPS4XP4-201ENST00000443195 763 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC28A2O43868 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC28A2O43868 DPPA3P1-201ENST00000448050 469 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC28A2O43868 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC28A2O43868 RPL38P1-201ENST00000460914 211 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 RPS20P21-201ENST00000466859 343 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC28A2O43868 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC28A2O43868 RPL31P61-201ENST00000496160 376 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 AC091951.2-201ENST00000500762 203 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC28A2O43868 AC009646.1-201ENST00000510455 318 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC28A2O43868 MIR2114-201ENST00000516645 80 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 SNORA18.6-201ENST00000516792 115 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC28A2O43868 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC28A2O43868 AC022878.1-201ENST00000530684 149 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 PTP4A1P6-201ENST00000531034 478 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC28A2O43868 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC28A2O43868 RAB11AP2-201ENST00000545905 639 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC28A2O43868 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.79□□□□□ -1.8
SLC28A2O43868 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.79□□□□□ -1.8
SLC28A2O43868 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC28A2O43868 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC28A2O43868 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC28A2O43868 MIR4644-201ENST00000579929 84 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 MIR5684-201ENST00000585074 65 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC28A2O43868 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.79□□□□□ -1.8
SLC28A2O43868 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC28A2O43868 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC28A2O43868 DUXAP4-201ENST00000603046 613 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC28A2O43868 AC103710.1-201ENST00000610003 901 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 AL591424.2-201ENST00000617023 128 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 AC108479.2-201ENST00000617314 601 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 AC093648.1-201ENST00000623546 606 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC28A2O43868 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC28A2O43868 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC28A2O43868 AC004944.1-201ENST00000517807 3059 ntBASIC3.79□□□□□ -1.8
SLC28A2O43868 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC28A2O43868 MTND4P23-201ENST00000447723 1363 ntBASIC3.78□□□□□ -1.8
SLC28A2O43868 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SLC28A2O43868 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SLC28A2O43868 FAM35DP-201ENST00000323387 2712 ntBASIC3.78□□□□□ -1.8
SLC28A2O43868 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC28A2O43868 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SLC28A2O43868 RNU6-181P-201ENST00000363225 107 ntBASIC3.78□□□□□ -1.8
SLC28A2O43868 RNA5SP322-201ENST00000363617 119 ntBASIC3.78□□□□□ -1.8
SLC28A2O43868 U3.15-201ENST00000365398 212 ntBASIC3.78□□□□□ -1.8
SLC28A2O43868 RNU6-657P-201ENST00000383904 107 ntBASIC3.78□□□□□ -1.8
SLC28A2O43868 U8.14-201ENST00000390843 143 ntBASIC3.78□□□□□ -1.8
SLC28A2O43868 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC28A2O43868 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC28A2O43868 BX890604.2-201ENST00000427883 474 ntBASIC3.78□□□□□ -1.8
SLC28A2O43868 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SLC28A2O43868 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms