Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC2.69□□□□□ -1.98
RNF13O43567 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.69□□□□□ -1.98
RNF13O43567 RNU6-1282P-201ENST00000516735 96 ntBASIC2.69□□□□□ -1.98
RNF13O43567 SNORA31.22-201ENST00000517204 135 ntBASIC2.69□□□□□ -1.98
RNF13O43567 AC022861.1-201ENST00000522981 663 ntBASIC2.69□□□□□ -1.98
RNF13O43567 AP003066.2-201ENST00000529375 555 ntBASIC2.69□□□□□ -1.98
RNF13O43567 DEFB130C-202ENST00000530001 230 ntBASIC2.69□□□□□ -1.98
RNF13O43567 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.69□□□□□ -1.98
RNF13O43567 MIR5004-201ENST00000579078 107 ntBASIC2.69□□□□□ -1.98
RNF13O43567 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.69□□□□□ -1.98
RNF13O43567 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.69□□□□□ -1.98
RNF13O43567 SRGNP1-201ENST00000603392 451 ntBASIC2.69□□□□□ -1.98
RNF13O43567 AC013553.2-201ENST00000604244 589 ntBASIC2.69□□□□□ -1.98
RNF13O43567 AL137843.1-201ENST00000605078 385 ntBASIC2.69□□□□□ -1.98
RNF13O43567 AC069545.1-201ENST00000605671 358 ntBASIC2.69□□□□□ -1.98
RNF13O43567 AC069200.1-201ENST00000609511 323 ntBASIC2.69□□□□□ -1.98
RNF13O43567 AC131902.3-201ENST00000611767 581 ntBASIC2.69□□□□□ -1.98
RNF13O43567 AC007318.2-201ENST00000620999 243 ntBASIC2.69□□□□□ -1.98
RNF13O43567 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
RNF13O43567 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.69□□□□□ -1.98
RNF13O43567 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.69□□□□□ -1.98
RNF13O43567 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.69□□□□□ -1.98
RNF13O43567 AL356473.1-201ENST00000406203 1408 ntBASIC2.68□□□□□ -1.98
RNF13O43567 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RNF13O43567 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
RNF13O43567 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.68□□□□□ -1.98
RNF13O43567 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
RNF13O43567 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.68□□□□□ -1.98
RNF13O43567 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.68□□□□□ -1.98
RNF13O43567 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RNF13O43567 AC073325.2-201ENST00000339545 159 ntBASIC2.68□□□□□ -1.98
RNF13O43567 RNU1-105P-201ENST00000363470 161 ntBASIC2.68□□□□□ -1.98
RNF13O43567 SNORA71.1-201ENST00000364523 117 ntBASIC2.68□□□□□ -1.98
RNF13O43567 RNA5SP171-201ENST00000391071 115 ntBASIC2.68□□□□□ -1.98
RNF13O43567 SNORD88.1-201ENST00000408684 91 ntBASIC2.68□□□□□ -1.98
RNF13O43567 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.68□□□□□ -1.98
RNF13O43567 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.68□□□□□ -1.98
RNF13O43567 AC013262.1-201ENST00000426710 252 ntBASIC2.68□□□□□ -1.98
RNF13O43567 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.68□□□□□ -1.98
RNF13O43567 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.68□□□□□ -1.98
RNF13O43567 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.68□□□□□ -1.98
RNF13O43567 USP9YP22-201ENST00000438971 294 ntBASIC2.68□□□□□ -1.98
RNF13O43567 AL714022.1-201ENST00000439897 151 ntBASIC2.68□□□□□ -1.98
RNF13O43567 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.68□□□□□ -1.98
RNF13O43567 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.68□□□□□ -1.98
RNF13O43567 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.68□□□□□ -1.98
RNF13O43567 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.68□□□□□ -1.98
RNF13O43567 AC234775.1-201ENST00000454247 670 ntBASIC2.68□□□□□ -1.98
RNF13O43567 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.68□□□□□ -1.98
RNF13O43567 AL109741.2-201ENST00000455561 343 ntBASIC2.68□□□□□ -1.98
RNF13O43567 AC116337.2-201ENST00000477662 156 ntBASIC2.68□□□□□ -1.98
RNF13O43567 RPS27P26-201ENST00000494583 239 ntBASIC2.68□□□□□ -1.98
RNF13O43567 AC147055.4-201ENST00000504399 745 ntBASIC2.68□□□□□ -1.98
RNF13O43567 AC114322.1-201ENST00000506771 926 ntBASIC2.68□□□□□ -1.98
RNF13O43567 RNU6-928P-201ENST00000516876 104 ntBASIC2.68□□□□□ -1.98
RNF13O43567 AC087808.1-201ENST00000520501 361 ntBASIC2.68□□□□□ -1.98
RNF13O43567 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RNF13O43567 NDUFS5P6-201ENST00000529136 295 ntBASIC2.68□□□□□ -1.98
RNF13O43567 OR4R2P-201ENST00000530815 597 ntBASIC2.68□□□□□ -1.98
RNF13O43567 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.68□□□□□ -1.98
RNF13O43567 HIGD1AP17-201ENST00000554576 276 ntBASIC2.68□□□□□ -1.98
RNF13O43567 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.68□□□□□ -1.98
RNF13O43567 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RNF13O43567 MTND4LP25-201ENST00000570218 163 ntBASIC2.68□□□□□ -1.98
RNF13O43567 AC090615.1-201ENST00000577519 154 ntBASIC2.68□□□□□ -1.98
RNF13O43567 AC069304.2-201ENST00000605154 435 ntBASIC2.68□□□□□ -1.98
RNF13O43567 AL136363.1-201ENST00000605349 337 ntBASIC2.68□□□□□ -1.98
RNF13O43567 AP002802.2-201ENST00000605877 235 ntBASIC2.68□□□□□ -1.98
RNF13O43567 AC079597.1-201ENST00000624306 508 ntBASIC2.68□□□□□ -1.98
RNF13O43567 CDR1-202ENST00000625883 1485 ntBASIC2.68□□□□□ -1.98
RNF13O43567 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.68□□□□□ -1.98
RNF13O43567 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RNF13O43567 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
RNF13O43567 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RNF13O43567 AP005901.5-201ENST00000545779 1796 ntBASIC2.67□□□□□ -1.98
RNF13O43567 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
RNF13O43567 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
RNF13O43567 HMGB1P17-201ENST00000403495 628 ntBASIC2.67□□□□□ -1.98
RNF13O43567 AC096533.1-201ENST00000411645 353 ntBASIC2.67□□□□□ -1.98
RNF13O43567 SPA17P1-201ENST00000416656 452 ntBASIC2.67□□□□□ -1.98
RNF13O43567 AL389915.1-201ENST00000422463 466 ntBASIC2.67□□□□□ -1.98
RNF13O43567 MTCO2P5-201ENST00000422621 426 ntBASIC2.67□□□□□ -1.98
RNF13O43567 C1DP1-201ENST00000426049 402 ntBASIC2.67□□□□□ -1.98
RNF13O43567 AC022018.1-201ENST00000430685 241 ntBASIC2.67□□□□□ -1.98
RNF13O43567 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.67□□□□□ -1.98
RNF13O43567 RPS29P6-201ENST00000438196 145 ntBASIC2.67□□□□□ -1.98
RNF13O43567 SDCBPP1-201ENST00000440192 890 ntBASIC2.67□□□□□ -1.98
RNF13O43567 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.67□□□□□ -1.98
RNF13O43567 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
RNF13O43567 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.67□□□□□ -1.98
RNF13O43567 TRGVB-201ENST00000453257 471 ntBASIC2.67□□□□□ -1.98
RNF13O43567 BX510359.1-201ENST00000456973 237 ntBASIC2.67□□□□□ -1.98
RNF13O43567 RNU7-23P-201ENST00000459465 62 ntBASIC2.67□□□□□ -1.98
RNF13O43567 RPL27AP5-201ENST00000469428 449 ntBASIC2.67□□□□□ -1.98
RNF13O43567 RPS29P2-201ENST00000479278 136 ntBASIC2.67□□□□□ -1.98
RNF13O43567 AL135752.1-201ENST00000479477 471 ntBASIC2.67□□□□□ -1.98
RNF13O43567 AC006445.1-201ENST00000491925 405 ntBASIC2.67□□□□□ -1.98
RNF13O43567 SEM1P1-201ENST00000506694 209 ntBASIC2.67□□□□□ -1.98
RNF13O43567 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.67□□□□□ -1.98
RNF13O43567 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms