Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.17□□□□□ -1.74
PROM1O43490 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.17□□□□□ -1.74
PROM1O43490 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC4.17□□□□□ -1.74
PROM1O43490 OR5BC1P-201ENST00000529327 739 ntBASIC4.17□□□□□ -1.74
PROM1O43490 OR4R1P-201ENST00000529879 463 ntBASIC4.17□□□□□ -1.74
PROM1O43490 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC4.17□□□□□ -1.74
PROM1O43490 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.17□□□□□ -1.74
PROM1O43490 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.17□□□□□ -1.74
PROM1O43490 MIR3146-201ENST00000580367 79 ntBASIC4.17□□□□□ -1.74
PROM1O43490 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.17□□□□□ -1.74
PROM1O43490 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.17□□□□□ -1.74
PROM1O43490 AC011712.1-201ENST00000588959 234 ntBASIC4.17□□□□□ -1.74
PROM1O43490 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.17□□□□□ -1.74
PROM1O43490 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.17□□□□□ -1.74
PROM1O43490 BNIP3P22-201ENST00000593399 556 ntBASIC4.17□□□□□ -1.74
PROM1O43490 AC079587.1-201ENST00000603846 277 ntBASIC4.17□□□□□ -1.74
PROM1O43490 RMST_3.1-201ENST00000611651 109 ntBASIC4.17□□□□□ -1.74
PROM1O43490 MIR6716-201ENST00000613413 80 ntBASIC4.17□□□□□ -1.74
PROM1O43490 AL713922.2-201ENST00000619384 716 ntBASIC4.17□□□□□ -1.74
PROM1O43490 AC112204.3-201ENST00000623822 332 ntBASIC4.17□□□□□ -1.74
PROM1O43490 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.17□□□□□ -1.74
PROM1O43490 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PROM1O43490 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
PROM1O43490 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.17□□□□□ -1.74
PROM1O43490 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.17□□□□□ -1.74
PROM1O43490 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.16□□□□□ -1.74
PROM1O43490 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PROM1O43490 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.16□□□□□ -1.74
PROM1O43490 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PROM1O43490 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.16□□□□□ -1.74
PROM1O43490 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PROM1O43490 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PROM1O43490 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.16□□□□□ -1.74
PROM1O43490 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.16□□□□□ -1.74
PROM1O43490 RNA5SP502-201ENST00000362694 119 ntBASIC4.16□□□□□ -1.74
PROM1O43490 RNU6-223P-201ENST00000362830 107 ntBASIC4.16□□□□□ -1.74
PROM1O43490 RNU6-451P-201ENST00000362921 107 ntBASIC4.16□□□□□ -1.74
PROM1O43490 SNORD74.4-201ENST00000364129 80 ntBASIC4.16□□□□□ -1.74
PROM1O43490 SNORA69-201ENST00000383895 132 ntBASIC4.16□□□□□ -1.74
PROM1O43490 MIR1250-201ENST00000408098 113 ntBASIC4.16□□□□□ -1.74
PROM1O43490 RNU2-15P-201ENST00000410692 191 ntBASIC4.16□□□□□ -1.74
PROM1O43490 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.16□□□□□ -1.74
PROM1O43490 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.16□□□□□ -1.74
PROM1O43490 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.16□□□□□ -1.74
PROM1O43490 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.16□□□□□ -1.74
PROM1O43490 ATP5JP1-201ENST00000431631 322 ntBASIC4.16□□□□□ -1.74
PROM1O43490 AC127537.2-201ENST00000439258 465 ntBASIC4.16□□□□□ -1.74
PROM1O43490 AC108734.1-201ENST00000439549 399 ntBASIC4.16□□□□□ -1.74
PROM1O43490 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.16□□□□□ -1.74
PROM1O43490 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.16□□□□□ -1.74
PROM1O43490 HMGN2P21-201ENST00000447764 270 ntBASIC4.16□□□□□ -1.74
PROM1O43490 RPL23AP2-201ENST00000471227 466 ntBASIC4.16□□□□□ -1.74
PROM1O43490 AC021382.1-201ENST00000483523 359 ntBASIC4.16□□□□□ -1.74
PROM1O43490 RN7SL812P-201ENST00000493791 279 ntBASIC4.16□□□□□ -1.74
PROM1O43490 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.16□□□□□ -1.74
PROM1O43490 AC023141.12-201ENST00000512399 199 ntBASIC4.16□□□□□ -1.74
PROM1O43490 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.16□□□□□ -1.74
PROM1O43490 AC016065.2-201ENST00000514530 444 ntBASIC4.16□□□□□ -1.74
PROM1O43490 RNA5SP401-201ENST00000515920 127 ntBASIC4.16□□□□□ -1.74
PROM1O43490 Y_RNA.675-201ENST00000516389 149 ntBASIC4.16□□□□□ -1.74
PROM1O43490 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.16□□□□□ -1.74
PROM1O43490 IGLVIV-53-201ENST00000520107 367 ntBASIC4.16□□□□□ -1.74
PROM1O43490 PHBP17-201ENST00000528576 541 ntBASIC4.16□□□□□ -1.74
PROM1O43490 AC007424.1-203ENST00000554613 687 ntBASIC4.16□□□□□ -1.74
PROM1O43490 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.16□□□□□ -1.74
PROM1O43490 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.16□□□□□ -1.74
PROM1O43490 AL138976.2-201ENST00000563989 694 ntBASIC4.16□□□□□ -1.74
PROM1O43490 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.16□□□□□ -1.74
PROM1O43490 AC015917.1-201ENST00000579654 510 ntBASIC4.16□□□□□ -1.74
PROM1O43490 AC023575.1-201ENST00000580510 358 ntBASIC4.16□□□□□ -1.74
PROM1O43490 AC005261.5-201ENST00000596280 355 ntBASIC4.16□□□□□ -1.74
PROM1O43490 AC007566.2-201ENST00000603642 413 ntBASIC4.16□□□□□ -1.74
PROM1O43490 Z98200.1-201ENST00000607298 470 ntBASIC4.16□□□□□ -1.74
PROM1O43490 AL596245.1-201ENST00000618994 362 ntBASIC4.16□□□□□ -1.74
PROM1O43490 RMST_9.1-201ENST00000619945 193 ntBASIC4.16□□□□□ -1.74
PROM1O43490 AC006504.8-201ENST00000621046 635 ntBASIC4.16□□□□□ -1.74
PROM1O43490 AL136221.1-201ENST00000621449 509 ntBASIC4.16□□□□□ -1.74
PROM1O43490 AC024940.5-201ENST00000622889 474 ntBASIC4.16□□□□□ -1.74
PROM1O43490 AL159972.1-201ENST00000625150 448 ntBASIC4.16□□□□□ -1.74
PROM1O43490 AC112487.2-201ENST00000637950 304 ntBASIC4.16□□□□□ -1.74
PROM1O43490 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PROM1O43490 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
PROM1O43490 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PROM1O43490 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PROM1O43490 ZNF680P1-201ENST00000436625 1469 ntBASIC4.16□□□□□ -1.74
PROM1O43490 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PROM1O43490 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.16□□□□□ -1.74
PROM1O43490 AC011460.1-201ENST00000636268 1834 ntBASIC4.16□□□□□ -1.74
PROM1O43490 PABPC1P7-201ENST00000413177 1513 ntBASIC4.16□□□□□ -1.74
PROM1O43490 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.15□□□□□ -1.74
PROM1O43490 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
PROM1O43490 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PROM1O43490 Y_RNA.142-201ENST00000363491 102 ntBASIC4.15□□□□□ -1.75
PROM1O43490 RNA5SP167-201ENST00000365461 116 ntBASIC4.15□□□□□ -1.75
PROM1O43490 RNU6-108P-201ENST00000365558 107 ntBASIC4.15□□□□□ -1.75
PROM1O43490 AL591416.1-201ENST00000404015 867 ntBASIC4.15□□□□□ -1.75
PROM1O43490 RNA5SP118-201ENST00000410385 109 ntBASIC4.15□□□□□ -1.75
PROM1O43490 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.15□□□□□ -1.75
PROM1O43490 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.15□□□□□ -1.75
PROM1O43490 AC137499.1-201ENST00000427602 88 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 172.6 ms