Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 ZNF321P-202ENST00000550843 495 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.14□□□□□ -1.91
LRRTM2O43300 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRTM2O43300 AC009712.1-201ENST00000564938 316 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 MIR3124-201ENST00000582636 67 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.14□□□□□ -1.91
LRRTM2O43300 AL451007.1-201ENST00000595491 289 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 AC055876.5-201ENST00000605667 259 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.14□□□□□ -1.91
LRRTM2O43300 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.14□□□□□ -1.91
LRRTM2O43300 AC009464.1-201ENST00000615731 469 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.14□□□□□ -1.91
LRRTM2O43300 AP003355.3-201ENST00000623465 114 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 AP003485.2-201ENST00000623636 610 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 AC006386.2-201ENST00000624491 75 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 AC012005.1-201ENST00000624575 75 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 U6.101-201ENST00000637707 76 ntBASIC3.14□□□□□ -1.91
LRRTM2O43300 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LRRTM2O43300 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LRRTM2O43300 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
LRRTM2O43300 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
LRRTM2O43300 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
LRRTM2O43300 NUP58P1-201ENST00000502546 1738 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 AP002907.1-201ENST00000606361 1430 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
LRRTM2O43300 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LRRTM2O43300 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
LRRTM2O43300 RNU6-931P-201ENST00000363850 107 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
LRRTM2O43300 Y_RNA.510-201ENST00000384511 114 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 TAS2R15P-201ENST00000390674 928 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 U3.29-201ENST00000391296 212 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 CYCSP45-201ENST00000402289 315 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 RNA5SP293-201ENST00000410527 113 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.13□□□□□ -1.91
LRRTM2O43300 AC006960.1-201ENST00000419980 153 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.13□□□□□ -1.91
LRRTM2O43300 TXNL1P1-201ENST00000429528 554 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.13□□□□□ -1.91
LRRTM2O43300 MTATP6P17-201ENST00000431030 672 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRTM2O43300 MTND1P26-201ENST00000440488 538 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRTM2O43300 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.13□□□□□ -1.91
LRRTM2O43300 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.13□□□□□ -1.91
LRRTM2O43300 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRTM2O43300 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.13□□□□□ -1.91
LRRTM2O43300 RNA5SP310-201ENST00000459084 116 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 AC026410.2-201ENST00000460281 156 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRTM2O43300 RPL23AP67-201ENST00000465341 474 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 AC093663.1-201ENST00000497190 394 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 AC147055.4-201ENST00000504399 745 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 SNORA70.19-201ENST00000516717 90 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRTM2O43300 DEFB131D-201ENST00000526803 184 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 OR4P1P-201ENST00000530808 1136 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 TRAV37-201ENST00000553906 342 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 EIF4BP1-201ENST00000554881 351 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRTM2O43300 CYCSP2-201ENST00000558168 301 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 HSPE1P3-201ENST00000559254 309 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRTM2O43300 MIR4637-201ENST00000582405 84 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 AC067852.3-201ENST00000589177 561 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.13□□□□□ -1.91
LRRTM2O43300 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.13□□□□□ -1.91
LRRTM2O43300 VN1R90P-201ENST00000595717 726 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 AL139344.1-201ENST00000605228 195 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.13□□□□□ -1.91
LRRTM2O43300 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LRRTM2O43300 AL390862.1-201ENST00000635467 1469 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
LRRTM2O43300 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
LRRTM2O43300 MAPK10-322ENST00000641485 4530 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 AC090740.1-201ENST00000623193 2262 ntBASIC3.13□□□□□ -1.91
LRRTM2O43300 CUL1P1-201ENST00000509510 2425 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.12□□□□□ -1.91
LRRTM2O43300 AC104454.1-201ENST00000421341 1401 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 OR4G11P-202ENST00000642116 1414 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LRRTM2O43300 RPL23AP57-201ENST00000332361 466 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
LRRTM2O43300 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.12□□□□□ -1.91
LRRTM2O43300 SNRPEP2-201ENST00000397592 279 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 DHFRP6-201ENST00000401776 268 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 HMGB1P17-201ENST00000403495 628 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 MIR1284-201ENST00000408337 120 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 MIR1289-1-201ENST00000408836 144 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.12□□□□□ -1.91
LRRTM2O43300 RAP1BP1-201ENST00000412709 553 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.12□□□□□ -1.91
LRRTM2O43300 MTCYBP38-201ENST00000417160 1123 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 SSXP9-201ENST00000417503 292 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.12□□□□□ -1.91
LRRTM2O43300 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 RPL23AP22-201ENST00000437556 453 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 AL008629.1-201ENST00000438615 184 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 AC092427.1-201ENST00000439177 601 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 AC093392.2-201ENST00000450682 337 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms