Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.08□□□□□ -1.6
SRGAP3O43295 ZNF705CP-201ENST00000530515 889 ntBASIC5.08□□□□□ -1.6
SRGAP3O43295 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.08□□□□□ -1.6
SRGAP3O43295 SCOCP1-201ENST00000554676 349 ntBASIC5.08□□□□□ -1.6
SRGAP3O43295 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC5.08□□□□□ -1.6
SRGAP3O43295 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.08□□□□□ -1.6
SRGAP3O43295 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SRGAP3O43295 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SRGAP3O43295 AL356585.4-201ENST00000623078 1229 ntBASIC5.08□□□□□ -1.6
SRGAP3O43295 CR381572.1-201ENST00000625098 102 ntBASIC5.08□□□□□ -1.6
SRGAP3O43295 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.08□□□□□ -1.6
SRGAP3O43295 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SRGAP3O43295 OR4G1P-203ENST00000641984 1631 ntBASIC5.08□□□□□ -1.6
SRGAP3O43295 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SRGAP3O43295 Z82217.1-201ENST00000625157 8149 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 AC107081.3-201ENST00000612715 2034 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SRGAP3O43295 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SRGAP3O43295 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.07□□□□□ -1.6
SRGAP3O43295 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SRGAP3O43295 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SRGAP3O43295 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.07□□□□□ -1.6
SRGAP3O43295 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SRGAP3O43295 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SRGAP3O43295 RNY4P16-201ENST00000364768 94 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 RNU6-169P-201ENST00000365336 107 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 RNU6-108P-201ENST00000365558 107 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 SNORA75.4-201ENST00000391278 119 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.07□□□□□ -1.6
SRGAP3O43295 AL133384.1-201ENST00000412744 351 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 NCOR1P3-201ENST00000420479 303 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.07□□□□□ -1.6
SRGAP3O43295 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.07□□□□□ -1.6
SRGAP3O43295 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC5.07□□□□□ -1.6
SRGAP3O43295 IFNA20P-201ENST00000436840 528 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC5.07□□□□□ -1.6
SRGAP3O43295 RPL23AP74-201ENST00000437246 471 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.07□□□□□ -1.6
SRGAP3O43295 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.07□□□□□ -1.6
SRGAP3O43295 CACYBPP2-201ENST00000453625 678 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.07□□□□□ -1.6
SRGAP3O43295 APOOP2-201ENST00000461561 539 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 AC068587.1-201ENST00000483613 781 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.07□□□□□ -1.6
SRGAP3O43295 AC006499.6-201ENST00000511169 607 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 IFITM8P-201ENST00000522529 394 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.07□□□□□ -1.6
SRGAP3O43295 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.07□□□□□ -1.6
SRGAP3O43295 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.07□□□□□ -1.6
SRGAP3O43295 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.07□□□□□ -1.6
SRGAP3O43295 AC020661.2-201ENST00000560114 134 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.07□□□□□ -1.6
SRGAP3O43295 AL356432.3-201ENST00000568952 465 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SRGAP3O43295 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.07□□□□□ -1.6
SRGAP3O43295 AL451044.1-201ENST00000604867 238 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 AL158196.1-201ENST00000616786 434 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 CR392039.4-201ENST00000624968 501 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 MTND5P42-201ENST00000637720 498 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SRGAP3O43295 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SRGAP3O43295 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
SRGAP3O43295 AL118496.1-201ENST00000440201 1812 ntBASIC5.07□□□□□ -1.6
SRGAP3O43295 MTND4P35-201ENST00000604257 1375 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.06□□□□□ -1.6
SRGAP3O43295 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SRGAP3O43295 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SRGAP3O43295 AC090229.1-201ENST00000590983 1609 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC5.06□□□□□ -1.6
SRGAP3O43295 SNORA60-201ENST00000362396 134 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 SNORD35B-201ENST00000363660 87 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SRGAP3O43295 RNU6-441P-201ENST00000384545 106 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 MIR649-201ENST00000384843 97 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 DSTNP4-201ENST00000399472 474 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 AL136116.1-201ENST00000403591 381 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 RPL21P65-201ENST00000406094 466 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 RNU6-1148P-201ENST00000410992 104 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 NDUFB4P5-201ENST00000415445 361 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 RPL36AP36-201ENST00000418616 301 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC5.06□□□□□ -1.6
SRGAP3O43295 AC069285.2-201ENST00000440210 275 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 AC005297.2-201ENST00000450430 606 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 RPL5P30-201ENST00000465511 891 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 AC078785.3-201ENST00000476607 425 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 RPS15AP36-201ENST00000492022 382 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.06□□□□□ -1.6
SRGAP3O43295 AC005912.1-201ENST00000495392 255 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 RN7SKP13-201ENST00000515933 244 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 SUB1P1-201ENST00000524415 382 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.06□□□□□ -1.6
SRGAP3O43295 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SRGAP3O43295 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.06□□□□□ -1.6
SRGAP3O43295 LSM6P2-201ENST00000552208 177 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 AC025627.2-201ENST00000576220 160 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.06□□□□□ -1.6
SRGAP3O43295 MIR4742-201ENST00000581069 85 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms