Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.48□□□□□ -1.85
O00370 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.48□□□□□ -1.85
O00370 MTATP6P27-201ENST00000416987 621 ntBASIC3.48□□□□□ -1.85
O00370 USP9YP26-201ENST00000421008 661 ntBASIC3.48□□□□□ -1.85
O00370 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.48□□□□□ -1.85
O00370 AC079780.1-201ENST00000428259 207 ntBASIC3.48□□□□□ -1.85
O00370 AC005326.1-201ENST00000429197 123 ntBASIC3.48□□□□□ -1.85
O00370 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.48□□□□□ -1.85
O00370 HMGB3P11-201ENST00000440127 604 ntBASIC3.48□□□□□ -1.85
O00370 HSPE1P28-201ENST00000443139 211 ntBASIC3.48□□□□□ -1.85
O00370 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.48□□□□□ -1.85
O00370 OR6K5P-201ENST00000447050 945 ntBASIC3.48□□□□□ -1.85
O00370 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.48□□□□□ -1.85
O00370 USP9YP34-201ENST00000453983 808 ntBASIC3.48□□□□□ -1.85
O00370 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
O00370 AC090453.1-201ENST00000495560 436 ntBASIC3.48□□□□□ -1.85
O00370 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.48□□□□□ -1.85
O00370 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.48□□□□□ -1.85
O00370 HSPD1P15-201ENST00000505573 1122 ntBASIC3.48□□□□□ -1.85
O00370 AC006390.1-201ENST00000508068 283 ntBASIC3.48□□□□□ -1.85
O00370 MTND4LP22-201ENST00000508209 276 ntBASIC3.48□□□□□ -1.85
O00370 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.48□□□□□ -1.85
O00370 RNU6-759P-201ENST00000516740 103 ntBASIC3.48□□□□□ -1.85
O00370 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.48□□□□□ -1.85
O00370 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.48□□□□□ -1.85
O00370 HSPE1P3-201ENST00000559254 309 ntBASIC3.48□□□□□ -1.85
O00370 COX6CP3-201ENST00000580869 223 ntBASIC3.48□□□□□ -1.85
O00370 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.48□□□□□ -1.85
O00370 VN1R90P-201ENST00000595717 726 ntBASIC3.48□□□□□ -1.85
O00370 AC025811.1-201ENST00000604312 472 ntBASIC3.48□□□□□ -1.85
O00370 AC073657.2-201ENST00000605661 303 ntBASIC3.48□□□□□ -1.85
O00370 AC084757.4-201ENST00000616350 526 ntBASIC3.48□□□□□ -1.85
O00370 AC078883.4-201ENST00000623218 367 ntBASIC3.48□□□□□ -1.85
O00370 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.48□□□□□ -1.85
O00370 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
O00370 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
O00370 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
O00370 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.47□□□□□ -1.85
O00370 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
O00370 AC092326.2-201ENST00000624772 1561 ntBASIC3.47□□□□□ -1.85
O00370 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
O00370 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
O00370 RPL21P132-201ENST00000331267 462 ntBASIC3.47□□□□□ -1.85
O00370 RNA5SP267-201ENST00000364893 126 ntBASIC3.47□□□□□ -1.85
O00370 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
O00370 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
O00370 RNY3P9-201ENST00000384727 106 ntBASIC3.47□□□□□ -1.85
O00370 RNVU1-14-201ENST00000384770 164 ntBASIC3.47□□□□□ -1.85
O00370 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
O00370 AC063979.1-201ENST00000415539 377 ntBASIC3.47□□□□□ -1.85
O00370 AC083875.1-201ENST00000419509 405 ntBASIC3.47□□□□□ -1.85
O00370 MTND2P18-201ENST00000419962 1030 ntBASIC3.47□□□□□ -1.85
O00370 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.47□□□□□ -1.85
O00370 PRSS3P4-201ENST00000453323 162 ntBASIC3.47□□□□□ -1.85
O00370 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.47□□□□□ -1.85
O00370 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.47□□□□□ -1.85
O00370 AC105914.1-201ENST00000511798 226 ntBASIC3.47□□□□□ -1.85
O00370 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.47□□□□□ -1.85
O00370 RNU1-143P-201ENST00000516296 146 ntBASIC3.47□□□□□ -1.85
O00370 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.47□□□□□ -1.85
O00370 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.47□□□□□ -1.85
O00370 SNRPGP16-201ENST00000533275 226 ntBASIC3.47□□□□□ -1.85
O00370 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.47□□□□□ -1.85
O00370 ISCA1P3-201ENST00000577104 373 ntBASIC3.47□□□□□ -1.85
O00370 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.47□□□□□ -1.85
O00370 CKS1BP3-201ENST00000600888 237 ntBASIC3.47□□□□□ -1.85
O00370 SRGNP1-201ENST00000603392 451 ntBASIC3.47□□□□□ -1.85
O00370 AL596327.1-201ENST00000603629 213 ntBASIC3.47□□□□□ -1.85
O00370 AP000811.1-201ENST00000603803 651 ntBASIC3.47□□□□□ -1.85
O00370 AC008962.1-201ENST00000605729 304 ntBASIC3.47□□□□□ -1.85
O00370 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.47□□□□□ -1.85
O00370 U1.23-201ENST00000610293 146 ntBASIC3.47□□□□□ -1.85
O00370 AL110115.1-201ENST00000614396 364 ntBASIC3.47□□□□□ -1.85
O00370 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.47□□□□□ -1.85
O00370 RNU1-68P-201ENST00000615382 146 ntBASIC3.47□□□□□ -1.85
O00370 U1.39-201ENST00000621562 146 ntBASIC3.47□□□□□ -1.85
O00370 AL360181.4-201ENST00000621752 134 ntBASIC3.47□□□□□ -1.85
O00370 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.47□□□□□ -1.85
O00370 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.47□□□□□ -1.85
O00370 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.47□□□□□ -1.85
O00370 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
O00370 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
O00370 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
O00370 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
O00370 AC002546.1-201ENST00000588041 2504 ntBASIC3.46□□□□□ -1.85
O00370 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.85
O00370 AL356473.1-201ENST00000406203 1408 ntBASIC3.46□□□□□ -1.86
O00370 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
O00370 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.46□□□□□ -1.86
O00370 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.46□□□□□ -1.86
O00370 RPL23AP57-201ENST00000332361 466 ntBASIC3.46□□□□□ -1.86
O00370 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
O00370 RNU6-777P-201ENST00000364265 104 ntBASIC3.46□□□□□ -1.86
O00370 RNA5SP72-201ENST00000364442 117 ntBASIC3.46□□□□□ -1.86
O00370 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
O00370 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
O00370 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.46□□□□□ -1.86
O00370 U3.29-201ENST00000391296 212 ntBASIC3.46□□□□□ -1.86
O00370 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.46□□□□□ -1.86
O00370 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms