Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 RNU6-643P-201ENST00000384018 107 ntBASIC5.29□□□□□ -1.56
RNF223E7ERA6 SNORA29-201ENST00000384183 140 ntBASIC5.29□□□□□ -1.56
RNF223E7ERA6 SNORD116-21-201ENST00000384507 92 ntBASIC5.29□□□□□ -1.56
RNF223E7ERA6 SNORA8.3-201ENST00000384679 139 ntBASIC5.29□□□□□ -1.56
RNF223E7ERA6 MIR199B-201ENST00000384849 110 ntBASIC5.29□□□□□ -1.56
RNF223E7ERA6 RNU6-882P-201ENST00000391025 103 ntBASIC5.29□□□□□ -1.56
RNF223E7ERA6 MTHFD2P2-201ENST00000407725 247 ntBASIC5.29□□□□□ -1.56
RNF223E7ERA6 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF223E7ERA6 AL031737.1-201ENST00000450125 223 ntBASIC5.29□□□□□ -1.56
RNF223E7ERA6 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.29□□□□□ -1.56
RNF223E7ERA6 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
RNF223E7ERA6 SNORD33.1-201ENST00000516213 88 ntBASIC5.29□□□□□ -1.56
RNF223E7ERA6 IGHV4-55-201ENST00000520889 368 ntBASIC5.29□□□□□ -1.56
RNF223E7ERA6 ZNF192P1-203ENST00000565888 810 ntBASIC5.29□□□□□ -1.56
RNF223E7ERA6 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.29□□□□□ -1.56
RNF223E7ERA6 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.29□□□□□ -1.56
RNF223E7ERA6 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.29□□□□□ -1.56
RNF223E7ERA6 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF223E7ERA6 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF223E7ERA6 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
RNF223E7ERA6 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
RNF223E7ERA6 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF223E7ERA6 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF223E7ERA6 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.29□□□□□ -1.56
RNF223E7ERA6 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
RNF223E7ERA6 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF223E7ERA6 TEK-202ENST00000406359 3935 ntTSL 2 BASIC5.29□□□□□ -1.56
RNF223E7ERA6 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
RNF223E7ERA6 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.28□□□□□ -1.56
RNF223E7ERA6 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNF223E7ERA6 OR5T2-202ENST00000641661 2062 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
RNF223E7ERA6 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
RNF223E7ERA6 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF223E7ERA6 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF223E7ERA6 AP000756.2-201ENST00000624168 2567 ntBASIC5.28□□□□□ -1.56
RNF223E7ERA6 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNF223E7ERA6 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNF223E7ERA6 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF223E7ERA6 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF223E7ERA6 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF223E7ERA6 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF223E7ERA6 RNA5SP477-201ENST00000362639 119 ntBASIC5.28□□□□□ -1.56
RNF223E7ERA6 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF223E7ERA6 AL391361.1-201ENST00000405580 489 ntBASIC5.28□□□□□ -1.56
RNF223E7ERA6 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF223E7ERA6 AC010095.1-201ENST00000443543 144 ntBASIC5.28□□□□□ -1.56
RNF223E7ERA6 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF223E7ERA6 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC5.28□□□□□ -1.56
RNF223E7ERA6 RNU6-625P-201ENST00000459412 107 ntBASIC5.28□□□□□ -1.56
RNF223E7ERA6 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC5.28□□□□□ -1.56
RNF223E7ERA6 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RNF223E7ERA6 AC114781.3-201ENST00000512083 142 ntBASIC5.28□□□□□ -1.56
RNF223E7ERA6 AC130365.2-201ENST00000525882 1201 ntBASIC5.28□□□□□ -1.56
RNF223E7ERA6 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.28□□□□□ -1.56
RNF223E7ERA6 AC051619.2-201ENST00000559063 397 ntBASIC5.28□□□□□ -1.56
RNF223E7ERA6 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.28□□□□□ -1.56
RNF223E7ERA6 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.28□□□□□ -1.56
RNF223E7ERA6 AC005332.4-201ENST00000592752 579 ntBASIC5.28□□□□□ -1.56
RNF223E7ERA6 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF223E7ERA6 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF223E7ERA6 AL590392.1-201ENST00000604960 446 ntBASIC5.28□□□□□ -1.56
RNF223E7ERA6 AC004467.1-201ENST00000615678 330 ntBASIC5.28□□□□□ -1.56
RNF223E7ERA6 MIR6826-201ENST00000617808 98 ntBASIC5.28□□□□□ -1.56
RNF223E7ERA6 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC5.28□□□□□ -1.56
RNF223E7ERA6 AC245014.3-201ENST00000618589 347 ntBASIC5.28□□□□□ -1.56
RNF223E7ERA6 AC241585.2-209ENST00000638217 143 ntBASIC5.28□□□□□ -1.56
RNF223E7ERA6 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
RNF223E7ERA6 DMD-202ENST00000343523 5623 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF223E7ERA6 AC241584.2-201ENST00000637142 2090 ntBASIC5.28□□□□□ -1.56
RNF223E7ERA6 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF223E7ERA6 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNF223E7ERA6 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNF223E7ERA6 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
RNF223E7ERA6 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC5.28□□□□□ -1.56
RNF223E7ERA6 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF223E7ERA6 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
RNF223E7ERA6 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC5.28□□□□□ -1.56
RNF223E7ERA6 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RNF223E7ERA6 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.28□□□□□ -1.56
RNF223E7ERA6 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RNF223E7ERA6 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF223E7ERA6 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC5.27□□□□□ -1.57
RNF223E7ERA6 AC007993.1-201ENST00000621298 2430 ntBASIC5.27□□□□□ -1.57
RNF223E7ERA6 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF223E7ERA6 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF223E7ERA6 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC5.27□□□□□ -1.57
RNF223E7ERA6 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF223E7ERA6 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC5.27□□□□□ -1.57
RNF223E7ERA6 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC5.27□□□□□ -1.57
RNF223E7ERA6 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RNF223E7ERA6 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RNF223E7ERA6 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF223E7ERA6 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
RNF223E7ERA6 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF223E7ERA6 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RNF223E7ERA6 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
RNF223E7ERA6 Y_RNA.35-201ENST00000362601 101 ntBASIC5.27□□□□□ -1.57
RNF223E7ERA6 RNA5SP242-201ENST00000364171 118 ntBASIC5.27□□□□□ -1.57
RNF223E7ERA6 CRP-203ENST00000368111 512 ntTSL 3 BASIC5.27□□□□□ -1.57
RNF223E7ERA6 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms