Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 Y_RNA.374-201ENST00000365606 101 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 MTND3P20-201ENST00000407663 186 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 RPL7P37-201ENST00000425095 738 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 ZNF965P-201ENST00000432501 817 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 HSPE1P28-201ENST00000443139 211 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 AL627224.1-201ENST00000448334 444 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 PPP1R2P5-201ENST00000457256 603 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 AC092754.2-201ENST00000463506 460 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 TRAV31-201ENST00000502780 342 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 SNORA25.15-201ENST00000516487 89 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 MIR4506-201ENST00000584693 77 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 AL356575.1-201ENST00000603008 283 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 AC004943.3-201ENST00000624116 600 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 AC092159.4-201ENST00000624944 550 ntBASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
COL6A6A6NMZ7 FAM35CP-201ENST00000554755 2470 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 RNU6-31P-201ENST00000384388 108 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 AL627390.1-201ENST00000396055 340 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 BTBD10P2-201ENST00000404779 676 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 CBWD4P-201ENST00000445695 655 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 HMGB3P21-201ENST00000452483 547 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 CDC42P1-201ENST00000456658 548 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 AC111193.1-201ENST00000504097 155 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 ARL4AP2-201ENST00000507378 601 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 AC022784.5-201ENST00000522241 437 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 AC011604.1-201ENST00000545978 196 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 AC090953.1-201ENST00000604305 1092 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 AC100814.1-201ENST00000606963 623 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 MIR8081-201ENST00000611533 95 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 AK6-205ENST00000618980 483 ntTSL 2 BASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 U3.15-201ENST00000365398 212 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 MT-TP-201ENST00000387461 68 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 HSPE1P26-201ENST00000405341 275 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 AL358453.1-201ENST00000422522 250 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 AL138785.1-201ENST00000425821 331 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 FO393414.1-201ENST00000428697 1184 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 RPL7P31-201ENST00000450192 724 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 AC109486.1-201ENST00000486833 374 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 AC012170.1-201ENST00000495139 359 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 RNU6-1308P-201ENST00000516817 103 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 HAUS1P3-201ENST00000523909 662 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 AC126118.1-201ENST00000607744 628 ntBASIC1.68□□□□□ -2.14
COL6A6A6NMZ7 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 SNORA7.1-201ENST00000363750 139 ntBASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 MIR320B1-201ENST00000390209 79 ntBASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 SNORA26.7-201ENST00000391288 122 ntBASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 SAR1AP2-201ENST00000392696 594 ntBASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 CD3D-202ENST00000392884 476 ntTSL 2 BASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 RPS7P2-201ENST00000435134 607 ntBASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 RPS29P11-201ENST00000496507 171 ntBASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 AC067904.2-201ENST00000517322 1283 ntBASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 AC098848.2-201ENST00000588023 330 ntBASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 VN1R84P-201ENST00000593697 235 ntBASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 AC019159.1-201ENST00000605094 187 ntBASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 uc_338.5-201ENST00000611839 155 ntBASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 VN1R7P-201ENST00000619242 903 ntBASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 CFTRP2-201ENST00000634304 199 ntBASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 SEPT7P7-201ENST00000420492 1301 ntBASIC1.67□□□□□ -2.14
COL6A6A6NMZ7 AC093536.2-201ENST00000565257 1406 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 RNU1-138P-201ENST00000384093 164 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 AL589655.1-201ENST00000405398 482 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 RNU2-20P-201ENST00000410425 191 ntBASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC1.66□□□□□ -2.14
COL6A6A6NMZ7 TRIM60P13-201ENST00000432350 1283 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms