Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.84□□□□□ -2.11
TRAV17A0A0B4J275 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
TRAV17A0A0B4J275 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
TRAV17A0A0B4J275 MTND4P35-201ENST00000604257 1375 ntBASIC1.84□□□□□ -2.12
TRAV17A0A0B4J275 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.83□□□□□ -2.12
TRAV17A0A0B4J275 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
TRAV17A0A0B4J275 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV17A0A0B4J275 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV17A0A0B4J275 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.83□□□□□ -2.12
TRAV17A0A0B4J275 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC1.83□□□□□ -2.12
TRAV17A0A0B4J275 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.83□□□□□ -2.12
TRAV17A0A0B4J275 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.83□□□□□ -2.12
TRAV17A0A0B4J275 CDC42P4-201ENST00000510507 563 ntBASIC1.83□□□□□ -2.12
TRAV17A0A0B4J275 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.83□□□□□ -2.12
TRAV17A0A0B4J275 RNU6-991P-201ENST00000516168 107 ntBASIC1.83□□□□□ -2.12
TRAV17A0A0B4J275 IGLV3-17-201ENST00000519099 244 ntBASIC1.83□□□□□ -2.12
TRAV17A0A0B4J275 HMGB1P1-201ENST00000522557 636 ntBASIC1.83□□□□□ -2.12
TRAV17A0A0B4J275 AC092474.3-201ENST00000603022 568 ntBASIC1.83□□□□□ -2.12
TRAV17A0A0B4J275 AL121917.1-203ENST00000605534 577 ntBASIC1.83□□□□□ -2.12
TRAV17A0A0B4J275 AC093673.2-201ENST00000609674 331 ntBASIC1.83□□□□□ -2.12
TRAV17A0A0B4J275 AC244517.12-201ENST00000623581 663 ntBASIC1.83□□□□□ -2.12
TRAV17A0A0B4J275 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
TRAV17A0A0B4J275 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 AC135776.4-201ENST00000624300 1904 ntBASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 RNU6-31P-201ENST00000384388 108 ntBASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 AL139156.1-201ENST00000412785 841 ntBASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 SDR42E1P3-201ENST00000438345 502 ntBASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 AC023512.1-201ENST00000444513 499 ntBASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 FABP5P13-201ENST00000452144 328 ntBASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 AC233279.1-201ENST00000455300 423 ntBASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 AC008494.2-201ENST00000514544 370 ntBASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 RNA5SP458-201ENST00000516188 119 ntBASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 RNU4-18P-201ENST00000516751 149 ntBASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 RN7SKP219-201ENST00000516825 296 ntBASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 AC067904.2-201ENST00000517322 1283 ntBASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 AC087808.1-201ENST00000520501 361 ntBASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 AP003385.6-201ENST00000531603 374 ntBASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 AC068339.2-201ENST00000534395 618 ntBASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 NUTF2P8-201ENST00000604593 363 ntBASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 AC006329.2-201ENST00000611491 394 ntBASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 AL137847.3-201ENST00000611521 109 ntBASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 MIR6845-201ENST00000613182 61 ntBASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 U73479.1-201ENST00000618062 168 ntBASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 ATM-230ENST00000640388 578 ntTSL 5 BASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
TRAV17A0A0B4J275 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 Z82209.1-201ENST00000422141 2135 ntBASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 USP9YP27-201ENST00000418455 438 ntBASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 RPL21P32-201ENST00000419877 477 ntBASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 AL445685.2-201ENST00000422551 342 ntBASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 AC027124.2-201ENST00000428249 105 ntBASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 RPS23P3-201ENST00000470993 430 ntBASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 HMGB3P3-201ENST00000510526 400 ntBASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 AC104115.2-201ENST00000523026 687 ntBASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 SUB1P1-201ENST00000524415 382 ntBASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 AC107954.1-201ENST00000565906 727 ntBASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 MIR5694-201ENST00000581190 76 ntBASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
TRAV17A0A0B4J275 OR4G2P-202ENST00000641004 1759 ntBASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 MORF4L1P6-201ENST00000418771 268 ntBASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 RPL34P26-201ENST00000445636 354 ntBASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 CKS1BP2-201ENST00000497342 240 ntBASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 MTND3P24-201ENST00000506306 329 ntBASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.8□□□□□ -2.12
TRAV17A0A0B4J275 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms