Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 SET-203ENST00000372688 801 ntTSL 2 BASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 TAS2R15P-201ENST00000390674 928 ntBASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 ANAPC10P1-201ENST00000395991 556 ntBASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 AL162578.1-201ENST00000406202 378 ntBASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 OR51A3P-201ENST00000413596 924 ntBASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 MTCO2P17-201ENST00000424336 677 ntBASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 TPRKBP1-201ENST00000456243 481 ntBASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 snoU109.4-201ENST00000458953 143 ntBASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 SNORA70.16-201ENST00000516390 95 ntBASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 AC087276.1-201ENST00000529659 480 ntBASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 AP000916.1-201ENST00000533869 835 ntBASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 AC009163.5-201ENST00000575421 637 ntBASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 AC103810.1-201ENST00000579873 453 ntBASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 NRBF2P5-201ENST00000603087 788 ntBASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 AC112503.2-201ENST00000609005 552 ntBASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 AL161629.2-201ENST00000615347 275 ntBASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 AL121594.5-201ENST00000631724 573 ntBASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
TRAV41A0A0B4J266 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 ANKRD36P1-201ENST00000344424 659 ntBASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 RNU6-619P-201ENST00000365146 108 ntBASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 MIR525-201ENST00000384978 85 ntBASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 RNU4-27P-201ENST00000410889 139 ntBASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 RNU6-193P-201ENST00000410977 107 ntBASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 RPS12P2-201ENST00000439728 269 ntBASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 HSFY3P-201ENST00000444242 1191 ntBASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 AC009961.3-201ENST00000449832 765 ntBASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 RPS3P1-201ENST00000456781 192 ntBASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 AC119751.5-201ENST00000514077 770 ntBASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 RPL7P20-201ENST00000520308 745 ntBASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 AP001646.1-201ENST00000527936 915 ntBASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 AC011260.1-201ENST00000578420 472 ntBASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 RN7SL622P-201ENST00000585292 275 ntBASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 AC133794.1-201ENST00000602731 914 ntBASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 KATNBL1P5-201ENST00000605015 517 ntBASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 AL136363.1-201ENST00000605349 337 ntBASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 AC009318.4-201ENST00000620496 486 ntBASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 MIR6852-201ENST00000621699 66 ntBASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 AC027309.3-201ENST00000623419 351 ntBASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 AL355596.1-201ENST00000565399 3996 ntBASIC1.94□□□□□ -2.1
TRAV41A0A0B4J266 AC008432.1-201ENST00000615912 1320 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 SNORD82-201ENST00000365530 70 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 SNORA41-201ENST00000384675 132 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 SNORD65C-201ENST00000390962 71 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 UBE2V1P2-201ENST00000397758 440 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 AL359511.1-201ENST00000402970 211 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 EIF4EBP2P3-201ENST00000403144 334 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 AL158050.1-201ENST00000416077 457 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 AL357078.2-201ENST00000416486 427 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 AL365496.1-201ENST00000426885 215 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 AC012497.1-201ENST00000429392 575 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 AC098826.1-201ENST00000433943 471 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 RSL24D1P8-201ENST00000434442 492 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 AP000852.1-201ENST00000472460 573 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 KC877373.1-201ENST00000479066 408 ntBASIC1.93□□□□□ -2.1
TRAV41A0A0B4J266 RPL23AP70-201ENST00000483361 460 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms