Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.69□□□□□ -1.66
COL4A3BPQ9Y5P4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 RNU6-511P-201ENST00000363496 107 ntBASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 RN7SKP33-201ENST00000410942 340 ntBASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 TRAPPC2P4-201ENST00000421750 331 ntBASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 AC133104.1-201ENST00000429100 218 ntBASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 AC073587.1-201ENST00000447093 876 ntBASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 AC140076.1-201ENST00000449897 361 ntBASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 MTCO3P20-201ENST00000454926 688 ntBASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 RPS20P20-201ENST00000460498 340 ntBASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 RPS7P7-201ENST00000463499 571 ntBASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 RPL7AP28-201ENST00000464513 571 ntBASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 FTH1P2-201ENST00000466086 412 ntBASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 AL049874.1-201ENST00000489560 388 ntBASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 AC105252.1-201ENST00000503089 286 ntBASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 SNORA70.16-201ENST00000516390 95 ntBASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 AC069240.1-201ENST00000548774 375 ntBASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 AC009063.1-201ENST00000563342 702 ntBASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 RN7SL600P-201ENST00000581811 299 ntBASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 AC103710.2-201ENST00000609912 942 ntBASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 MARK2P15-201ENST00000432204 2186 ntBASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 AC011266.1-201ENST00000624119 3569 ntBASIC4.68□□□□□ -1.66
COL4A3BPQ9Y5P4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 AC008568.2-201ENST00000623862 2313 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 RNA5SP502-201ENST00000362694 119 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 SNORD56.2-201ENST00000363242 71 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 RNA5SP515-201ENST00000364570 118 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 RNU6-259P-201ENST00000383999 107 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 RNU1-13P-201ENST00000384499 162 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 MIR514A1-201ENST00000385133 98 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 LAP3P1-201ENST00000403648 294 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 AC007283.2-201ENST00000424739 197 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 OR4C10P-201ENST00000434991 931 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 RPL23AP46-201ENST00000438548 490 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 RPL23AP89-201ENST00000439324 255 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 MTCYBP1-201ENST00000454315 1119 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 ARL2BPP6-201ENST00000512757 439 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 RNU1-61P-201ENST00000516107 151 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 CBX3P5-201ENST00000552017 521 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 RPL21P12-201ENST00000559810 515 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 AL670379.6-201ENST00000603753 252 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 AL670379.11-201ENST00000604059 253 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 AC067959.1-201ENST00000604334 379 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 AC008162.1-201ENST00000604718 254 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 AL670379.1-201ENST00000604752 252 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 AC106900.2-201ENST00000604994 317 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 AL670379.5-201ENST00000605253 252 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 AL670379.12-201ENST00000605291 253 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 AL670379.8-201ENST00000605353 252 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 AL670379.7-201ENST00000605823 252 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 MIR7702-201ENST00000621931 59 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 AC084035.1-201ENST00000634543 607 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 AC008725.1-201ENST00000605123 2263 ntBASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
COL4A3BPQ9Y5P4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms