Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 RNU5A-1-201ENST00000362698 116 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 MIR767-201ENST00000390228 109 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 SPA17P1-201ENST00000416656 452 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 RPL7P37-201ENST00000425095 738 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 AL358075.3-201ENST00000426289 226 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 THAP5P1-201ENST00000439089 262 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 AL353691.1-201ENST00000451332 387 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 AC026410.2-201ENST00000460281 156 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 RPL27AP5-201ENST00000469428 449 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 AC117440.1-201ENST00000474107 571 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 MTCO2P9-201ENST00000503214 694 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 snoZ278.1-201ENST00000517059 112 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 AP000857.1-201ENST00000532151 543 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 AC125611.1-201ENST00000549563 229 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 HSPE1P3-201ENST00000559254 309 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 AC103810.1-201ENST00000579873 453 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 AC090330.1-201ENST00000588646 764 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 AC098483.2-201ENST00000603158 454 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 AC024560.3-201ENST00000608482 349 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 AL161734.1-201ENST00000609720 557 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 AP005229.2-201ENST00000609980 697 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 AL157770.1-201ENST00000623049 439 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 AP003399.1-201ENST00000637534 361 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 AC012321.1-201ENST00000561622 1588 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 AC135776.4-201ENST00000624300 1904 ntBASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.56□□□□□ -2
RHBDD3Q9Y3P4 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 SNORA71.1-201ENST00000364523 117 ntBASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 RNU6-207P-201ENST00000384137 107 ntBASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 AL356057.2-201ENST00000403318 432 ntBASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 RPS3AP24-201ENST00000407896 734 ntBASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 RPL37P4-201ENST00000448908 268 ntBASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 RPL31P41-201ENST00000477967 372 ntBASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 HSPE1P6-201ENST00000479457 291 ntBASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 AC098799.2-201ENST00000509466 868 ntBASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 AC113155.1-201ENST00000511141 769 ntBASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 AC024224.1-201ENST00000538284 609 ntBASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 OR4K8P-201ENST00000578842 1048 ntBASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 AC005498.1-201ENST00000592125 465 ntBASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 AC107871.2-201ENST00000612894 502 ntBASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 AC090132.2-201ENST00000615881 347 ntBASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 UCA1.1-201ENST00000620952 75 ntBASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 AC079597.1-201ENST00000624306 508 ntBASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 AC004777.1-201ENST00000624317 287 ntBASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 MIR6733-201ENST00000635723 61 ntBASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.55□□□□□ -2
RHBDD3Q9Y3P4 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 Y_RNA.25-201ENST00000362528 102 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 RNU1-35P-201ENST00000362782 153 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 RNA5SP374-201ENST00000362939 125 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 RNU6-76P-201ENST00000384060 104 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 PTGES3P2-201ENST00000407942 482 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 AL592310.1-201ENST00000414330 671 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 LUZP4P1-201ENST00000415420 344 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 MTATP6P27-201ENST00000416987 621 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 DPRXP1-201ENST00000426312 460 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 OFD1P3Y-201ENST00000453312 783 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 MTCO3P11-201ENST00000455103 774 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 RPS29P2-201ENST00000479278 136 ntBASIC2.54□□□□□ -2
RHBDD3Q9Y3P4 AC026414.1-201ENST00000504046 698 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms