Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 AC087359.1-201ENST00000508335 1740 ntBASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 AL672167.1-206ENST00000356293 943 ntBASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 AL133384.1-201ENST00000412744 351 ntBASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 AL356320.2-201ENST00000417263 507 ntBASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 AL137014.1-201ENST00000420490 1226 ntBASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 MTCO2P17-201ENST00000424336 677 ntBASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 SNRPGP6-201ENST00000451124 220 ntBASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 MTCO3P2-201ENST00000457365 171 ntBASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 AC073901.1-201ENST00000462471 408 ntBASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 RNU4-29P-201ENST00000515943 174 ntBASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 RNU6-27P-201ENST00000516146 107 ntBASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 RNU1-103P-201ENST00000516502 125 ntBASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 SNORA31.11-201ENST00000516528 139 ntBASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 RPPH1-2P-201ENST00000516688 293 ntBASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 UBTFL10-201ENST00000528532 562 ntBASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 MIR4446-201ENST00000578505 67 ntBASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 AL137847.3-201ENST00000611521 109 ntBASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 AC006213.5-201ENST00000619673 288 ntBASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 SCARNA15.3-201ENST00000626315 122 ntBASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 SCARNA4.1-201ENST00000628597 123 ntBASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 AC010680.1-201ENST00000590024 3590 ntBASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.23□□□□□ -2.05
HDGFL3Q9Y3E1 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 SNORD56.4-201ENST00000363883 71 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 RNU6-619P-201ENST00000365146 108 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 Y_RNA.510-201ENST00000384511 114 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 SNORA41-201ENST00000384675 132 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 ARF4P3-201ENST00000397387 509 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 AL359511.1-201ENST00000402970 211 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 AL162578.1-201ENST00000406202 378 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 TRIM60P13-201ENST00000432350 1283 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 NDUFB4P6-201ENST00000436819 366 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 AC093767.1-201ENST00000504523 156 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 RNA5SP148-201ENST00000516527 94 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 AC023824.3-201ENST00000569003 562 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 AC008739.2-201ENST00000597006 317 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 AL390838.2-201ENST00000602394 274 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 AC006023.1-201ENST00000603944 259 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 AC007621.1-201ENST00000604544 437 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 AC012443.1-201ENST00000605605 231 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 AC024560.3-201ENST00000608482 349 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 AL161734.1-201ENST00000609720 557 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 RMST_10.1-201ENST00000616309 154 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 AC091925.2-201ENST00000625059 256 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 AC110079.1-202ENST00000635213 138 ntBASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.22□□□□□ -2.05
HDGFL3Q9Y3E1 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 NACA3P-201ENST00000359690 648 ntBASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 RNU6-173P-201ENST00000364215 104 ntBASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 AL356057.1-202ENST00000402263 756 ntBASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 RPL7P37-201ENST00000425095 738 ntBASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 EZH2P1-201ENST00000431167 291 ntBASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 AL589880.1-201ENST00000448271 287 ntBASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 RPL31P50-201ENST00000471002 296 ntBASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 AC010625.1-201ENST00000511296 403 ntBASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 RN7SKP40-201ENST00000517211 242 ntBASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 AC104229.1-201ENST00000561364 255 ntBASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 MIR3609-201ENST00000582661 80 ntBASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 NRBF2P5-201ENST00000603087 788 ntBASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 AC011890.2-201ENST00000613393 294 ntBASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 AL136360.1-201ENST00000503377 1900 ntBASIC2.21□□□□□ -2.06
HDGFL3Q9Y3E1 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms