Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 SNORD23.1-201ENST00000408212 104 ntBASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 RNA5SP80-201ENST00000410475 111 ntBASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 RNU4-53P-201ENST00000410828 140 ntBASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 RPS15AP40-201ENST00000419621 391 ntBASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 UBE2D3P1-201ENST00000436669 444 ntBASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 AL031663.1-201ENST00000437445 219 ntBASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 AL445687.1-201ENST00000439946 251 ntBASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 HMGN1P5-201ENST00000448591 263 ntBASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 AL353705.4-201ENST00000449661 238 ntBASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 RNU7-26P-201ENST00000458980 63 ntBASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 SETP11-201ENST00000473027 690 ntBASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 AC006499.2-201ENST00000513470 337 ntBASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 AGGF1P5-201ENST00000567900 919 ntBASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 MIR3122-201ENST00000577243 73 ntBASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 AP001521.1-201ENST00000609150 300 ntBASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 Y_RNA.783-201ENST00000613546 102 ntBASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 HMGB1P24-202ENST00000615653 685 ntBASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 AC104307.1-201ENST00000616142 196 ntBASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 U73479.1-201ENST00000618062 168 ntBASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 ZNF90P1-201ENST00000480493 1951 ntBASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.35□□□□□ -2.19
UBE2D4Q9Y2X8 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 AL023807.1-201ENST00000407932 359 ntBASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 EIF1AXP1-201ENST00000419267 435 ntBASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 ZDHHC20P2-201ENST00000424108 429 ntBASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 HMGN2P19-201ENST00000425149 265 ntBASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 AC244033.1-201ENST00000426826 870 ntBASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 AL160175.1-201ENST00000428124 247 ntBASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 AL035407.1-201ENST00000429211 571 ntBASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 MTCYBP45-201ENST00000435243 565 ntBASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 AL136380.1-201ENST00000447970 162 ntBASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 RNA5SP233-201ENST00000459153 113 ntBASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 HSPE1P6-201ENST00000479457 291 ntBASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 TRBV12-1-201ENST00000479785 344 ntBASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 HMGB3P17-201ENST00000504195 649 ntBASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 OR5BM1P-201ENST00000512021 366 ntBASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 AC108120.2-201ENST00000512973 294 ntBASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 TRAV28-201ENST00000557548 323 ntBASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 ATP5F1P7-201ENST00000567330 760 ntBASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 MIR4672-201ENST00000583126 81 ntBASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 MIR6864-201ENST00000617935 70 ntBASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
UBE2D4Q9Y2X8 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
UBE2D4Q9Y2X8 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
UBE2D4Q9Y2X8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.34□□□□□ -2.2
UBE2D4Q9Y2X8 AC131280.1-202ENST00000624067 4211 ntBASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 FAM133CP-201ENST00000332869 704 ntBASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 RNU6-532P-201ENST00000384318 107 ntBASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 AC105402.1-201ENST00000413336 545 ntBASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 MTCYBP24-201ENST00000420387 1106 ntBASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 RPL32P28-201ENST00000443577 397 ntBASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 AC128713.1-201ENST00000471495 306 ntBASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 SYPL1P1-201ENST00000473622 768 ntBASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 RPL23AP41-201ENST00000484754 458 ntBASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 MTAPP1-201ENST00000489154 819 ntBASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 OR4G11P-201ENST00000492842 939 ntBASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 AC118465.1-201ENST00000513820 1271 ntBASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 OR10V3P-201ENST00000525712 725 ntBASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 AC009063.1-201ENST00000563342 702 ntBASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 AC090897.2-201ENST00000581715 130 ntBASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 OR1M4P-201ENST00000589199 287 ntBASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
UBE2D4Q9Y2X8 AL162233.1-201ENST00000620014 944 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms