Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 ZNF736P1Y-201ENST00000440402 1276 ntBASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 RPL23AP58-201ENST00000440453 469 ntBASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 SNRPGP6-201ENST00000451124 220 ntBASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 RBMY2UP-201ENST00000453474 324 ntBASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 AC005410.1-202ENST00000460347 485 ntBASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 RN7SL633P-201ENST00000488974 297 ntBASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 AC134050.1-201ENST00000495088 933 ntBASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 AC021146.8-201ENST00000507455 733 ntBASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 RNU6-150P-201ENST00000516237 95 ntBASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 OR7K1P-201ENST00000546439 926 ntBASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 HMGB1P14-201ENST00000557424 591 ntBASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 RN7SL703P-201ENST00000578485 302 ntBASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 AC068313.1-201ENST00000604028 1008 ntBASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 NUTF2P8-201ENST00000604593 363 ntBASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 uc_338.25-201ENST00000613756 156 ntBASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 AL109620.1-201ENST00000618738 1197 ntBASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 AC008443.7-201ENST00000622195 246 ntBASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 AC243312.2-201ENST00000623340 601 ntBASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 AC010680.1-201ENST00000590024 3590 ntBASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 Z83843.1-201ENST00000604070 3685 ntBASIC2.6□□□□□ -1.99
KCNIP3Q9Y2W7 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 RNU4-35P-201ENST00000362588 141 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 RNU1-64P-201ENST00000365443 163 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 AL049693.1-201ENST00000402760 611 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 MTCYBP38-201ENST00000417160 1123 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 AL356867.1-201ENST00000429623 299 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 OR4K11P-201ENST00000431829 904 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 ATP5F1P1-201ENST00000433775 569 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 AC009237.8-201ENST00000445492 379 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 UBBP3-201ENST00000445497 241 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 MTND1P31-201ENST00000449206 961 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 USP9YP10-201ENST00000454868 628 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 MTND2P39-201ENST00000457230 764 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 RPL30P9-201ENST00000465586 330 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 AC020898.1-201ENST00000474167 787 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 AP001025.2-201ENST00000490908 477 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 AIG1P1-201ENST00000503376 148 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 MTND5P4-201ENST00000514978 288 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 MTATP6P9-201ENST00000515039 680 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 RNA5SP76-201ENST00000516277 87 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 OR5G4P-201ENST00000525251 760 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 AP003497.1-201ENST00000528472 562 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 AC009712.1-201ENST00000564938 316 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 ACTR3BP3-201ENST00000565577 979 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 TMF1P1-201ENST00000576058 373 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 AC138761.3-201ENST00000579993 334 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 MIR4276-201ENST00000584832 70 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 AC013553.2-201ENST00000604244 589 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 AC073657.2-201ENST00000605661 303 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 AC245297.2-201ENST00000610119 565 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 AC116618.1-201ENST00000634617 774 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 MIR4275-201ENST00000636486 87 ntBASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
KCNIP3Q9Y2W7 FAM35BP-202ENST00000497389 3337 ntBASIC2.59□□□□□ -2
KCNIP3Q9Y2W7 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
KCNIP3Q9Y2W7 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.59□□□□□ -2
KCNIP3Q9Y2W7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -2
KCNIP3Q9Y2W7 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 RNU5E-8P-201ENST00000363502 116 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 SNORD56.5-201ENST00000364281 72 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 RNU4-68P-201ENST00000364314 141 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 RNU6-1027P-201ENST00000383998 107 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 Y_RNA.465-201ENST00000384293 102 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 MIR585-201ENST00000384887 94 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 MIR514A1-201ENST00000385133 98 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 TANK-203ENST00000402568 878 ntTSL 5 BASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 AL139095.1-201ENST00000404326 391 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 HMGN1P24-201ENST00000412282 298 ntBASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC2.58□□□□□ -2
KCNIP3Q9Y2W7 AL354692.1-201ENST00000423044 315 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms