Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
CLIP2Q9UDT6 AC092435.3-201ENST00000565538 3654 ntBASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 RNU6-7-201ENST00000364784 107 ntBASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 RNU6-8-201ENST00000365467 107 ntBASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 MIR506-201ENST00000384998 124 ntBASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 RNU6-298P-201ENST00000390888 96 ntBASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 AC109780.2-201ENST00000413467 845 ntBASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 GTF2IP7-202ENST00000436677 309 ntBASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 RPL37P4-201ENST00000448908 268 ntBASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 RPL36AP33-201ENST00000450395 310 ntBASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 snoU109.4-201ENST00000458953 143 ntBASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 AC104164.3-201ENST00000467363 1258 ntBASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 AC013828.1-201ENST00000481845 158 ntBASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 SUMO2P5-201ENST00000506790 245 ntBASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 AC119751.5-201ENST00000514077 770 ntBASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 AC090502.2-201ENST00000549267 280 ntBASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 AC106052.1-201ENST00000608029 497 ntBASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 AC120349.3-201ENST00000624377 529 ntBASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CLIP2Q9UDT6 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 SNORD65.1-201ENST00000390889 71 ntBASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 AL445669.2-201ENST00000454425 421 ntBASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 AC104982.1-201ENST00000478775 574 ntBASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 AC082651.2-201ENST00000496833 166 ntBASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 OR5G4P-201ENST00000525251 760 ntBASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 DUXAP5-201ENST00000529668 529 ntBASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 AC007536.1-201ENST00000533382 349 ntBASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 AC008127.2-201ENST00000549925 1075 ntBASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 AC087481.2-201ENST00000565492 330 ntBASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 AC010653.1-201ENST00000571108 881 ntBASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 MIR5708-201ENST00000579723 85 ntBASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 AC078899.3-201ENST00000599065 212 ntBASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 AC073387.2-201ENST00000604797 784 ntBASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 AL110115.1-201ENST00000614396 364 ntBASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 AC068831.7-201ENST00000616954 363 ntBASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.47□□□□□ -1.85
CLIP2Q9UDT6 AC012321.1-201ENST00000561622 1588 ntBASIC3.46□□□□□ -1.85
CLIP2Q9UDT6 RNU2-28P-201ENST00000410457 189 ntBASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 MRPL50P2-201ENST00000416821 482 ntBASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 AC104332.2-201ENST00000429959 156 ntBASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 CETN4P-201ENST00000432407 469 ntBASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 SEPT7P5-201ENST00000434048 306 ntBASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 SNRPEP4-201ENST00000435815 279 ntBASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 MTND2P22-201ENST00000444325 1033 ntBASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 AC079776.3-201ENST00000450665 370 ntBASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 AL122001.1-201ENST00000457027 370 ntBASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 PNPLA4P1-201ENST00000458328 305 ntBASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 HMGB1P25-201ENST00000468402 607 ntBASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 AC112673.1-201ENST00000513168 575 ntBASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 AC026801.2-201ENST00000515352 425 ntBASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 RN7SKP265-201ENST00000516448 223 ntBASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 EEF1A1P37-201ENST00000522748 715 ntBASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.46□□□□□ -1.86
CLIP2Q9UDT6 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 153.4 ms