Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 AC004217.3-201ENST00000551552 878 ntBASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 AC074051.3-201ENST00000570238 358 ntBASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 NRBF2P5-201ENST00000603087 788 ntBASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 AC079089.3-201ENST00000603094 673 ntBASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 AC021851.1-201ENST00000608537 1082 ntBASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 AL161629.2-201ENST00000615347 275 ntBASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 AC027309.3-201ENST00000623419 351 ntBASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 MFSD8-245ENST00000641743 948 ntBASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.23□□□□□ -2.05
VPS29Q9UBQ0 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 U3.29-201ENST00000391296 212 ntBASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 AL136372.1-201ENST00000403060 228 ntBASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 NANOGP5-201ENST00000424456 877 ntBASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 RPS15AP28-201ENST00000435088 386 ntBASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 CR769767.1-201ENST00000436337 346 ntBASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 BX248409.1-201ENST00000455497 255 ntBASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 RN7SL636P-201ENST00000497504 294 ntBASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 RNA5SP471-201ENST00000516971 106 ntBASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 OR4R1P-201ENST00000529879 463 ntBASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 OR4P1P-201ENST00000530808 1136 ntBASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 AC010546.1-201ENST00000569391 485 ntBASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 AC007336.1-201ENST00000576365 3828 ntBASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 AC011260.1-201ENST00000578420 472 ntBASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 MIR5007-201ENST00000583098 95 ntBASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 OR1M4P-201ENST00000589199 287 ntBASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 AC046143.2-201ENST00000609789 160 ntBASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 AC104237.2-201ENST00000612456 443 ntBASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 CTSLP2-204ENST00000629029 392 ntBASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 AC010680.1-201ENST00000590024 3590 ntBASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
VPS29Q9UBQ0 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 FTLP6-201ENST00000355274 422 ntBASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 RNU6-198P-201ENST00000384258 104 ntBASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 NDUFB4P4-201ENST00000404822 243 ntBASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 RNU6-193P-201ENST00000410977 107 ntBASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 ATP5F1P1-201ENST00000433775 569 ntBASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 OR51B8P-201ENST00000449892 769 ntBASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 MTCO1P18-201ENST00000455518 1419 ntBASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 PNPLA4P1-201ENST00000458328 305 ntBASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 AC092798.1-201ENST00000458542 409 ntBASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 AC126389.1-201ENST00000477436 290 ntBASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 RPS27P26-201ENST00000494583 239 ntBASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 AC104108.1-201ENST00000509930 412 ntBASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 AC025768.1-201ENST00000510057 267 ntBASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 RNU1-104P-201ENST00000517280 175 ntBASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 AC078814.3-201ENST00000553036 491 ntBASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 AC027176.1-201ENST00000560204 514 ntBASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 AP004247.3-201ENST00000608682 624 ntBASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 AC009159.1-201ENST00000618386 642 ntBASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 MIR6766-201ENST00000622641 72 ntBASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 AC007342.9-201ENST00000623877 1385 ntBASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
VPS29Q9UBQ0 PABPC1P9-201ENST00000426076 1612 ntBASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 RPL21P132-201ENST00000331267 462 ntBASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 SNORD82-201ENST00000365530 70 ntBASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 TAS2R15P-201ENST00000390674 928 ntBASIC2.2□□□□□ -2.06
VPS29Q9UBQ0 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms