Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AC095031.1-201ENST00000623685 672 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AC010733.2-201ENST00000589496 5702 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 OR4G11P-202ENST00000642116 1414 ntBASIC2.67□□□□□ -1.98
CLCF1Q9UBD9 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 AL390862.1-201ENST00000635467 1469 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 MIR148B-201ENST00000362252 99 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 RNU6-1155P-201ENST00000363554 107 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 SNORA80A-201ENST00000363922 136 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 RNU6-173P-201ENST00000364215 104 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 EEF1A1P41-201ENST00000414667 207 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 NANOGP5-201ENST00000424456 877 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 AC007742.1-201ENST00000425789 329 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 DPPA2P1-201ENST00000428060 556 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 AC022018.1-201ENST00000430685 241 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 ELOCP26-201ENST00000436067 329 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 AC009969.1-201ENST00000438726 172 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 AC004854.1-201ENST00000440356 349 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 AC092155.2-201ENST00000454675 477 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 AP001486.1-201ENST00000463339 476 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 AC108860.1-201ENST00000484521 383 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 AC096576.1-201ENST00000489014 359 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 AC083906.5-201ENST00000503722 328 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 AC109445.1-201ENST00000512356 383 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 CR383656.7-201ENST00000548164 174 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 AC023813.2-201ENST00000564321 469 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 DUXAP3-201ENST00000603616 594 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 AL353748.2-201ENST00000622148 471 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 AL137790.1-201ENST00000634283 177 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 AC106754.1-201ENST00000562632 1513 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 AC099786.3-201ENST00000565735 1410 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 AC002546.1-201ENST00000588041 2504 ntBASIC2.66□□□□□ -1.98
CLCF1Q9UBD9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
CLCF1Q9UBD9 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.65□□□□□ -1.98
CLCF1Q9UBD9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 RNU4-92P-201ENST00000363783 136 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 Y_RNA.465-201ENST00000384293 102 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 DHFRP6-201ENST00000401776 268 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 AL356131.1-201ENST00000405826 414 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 RNU2-47P-201ENST00000410649 186 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 RPL7P8-201ENST00000411964 730 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 MTCO2P8-201ENST00000412213 658 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 NDUFB4P5-201ENST00000415445 361 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 MTCO2P5-201ENST00000422621 426 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 MTCO2P23-201ENST00000425216 680 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 MTCO1P39-201ENST00000426148 480 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 AL121871.1-201ENST00000443413 436 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 ARPC3P5-201ENST00000448802 534 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 DUXAP8-207ENST00000456786 622 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 MTND1P16-201ENST00000465177 898 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 AC023424.2-201ENST00000493479 777 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 AC079395.1-201ENST00000510981 262 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 AL512347.1-201ENST00000566420 503 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 VN1R78P-201ENST00000597393 564 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 MTND3P19-201ENST00000603825 345 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 AC009220.3-201ENST00000604318 586 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 DUXAP10-204ENST00000612052 616 ntBASIC2.65□□□□□ -1.99
CLCF1Q9UBD9 AC016597.2-201ENST00000613256 341 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms