Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
CCDC88CQ9P219 AC026634.1-201ENST00000634369 198 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 CU459211.1-201ENST00000635667 749 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 AC068620.4-201ENST00000636730 1182 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
CCDC88CQ9P219 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CCDC88CQ9P219 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CCDC88CQ9P219 RNA5SP456-201ENST00000364002 114 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC88CQ9P219 AL513331.1-201ENST00000411908 397 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.03□□□□□ -2.08
CCDC88CQ9P219 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC88CQ9P219 TPTE2P1-204ENST00000435256 593 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 CBWD4P-201ENST00000445695 655 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC88CQ9P219 RPL21P99-201ENST00000480369 423 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 AC109486.1-201ENST00000486833 374 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC88CQ9P219 MTND4P2-201ENST00000507767 1203 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.03□□□□□ -2.08
CCDC88CQ9P219 AC087373.1-201ENST00000524920 491 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 AC022690.1-201ENST00000526681 550 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 AC018630.1-201ENST00000541376 925 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 DNAJC8P1-201ENST00000554535 372 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC88CQ9P219 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC88CQ9P219 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.03□□□□□ -2.08
CCDC88CQ9P219 SUMO2P14-201ENST00000604488 293 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 AC018618.2-201ENST00000604770 446 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 AC245517.5-201ENST00000611529 162 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CCDC88CQ9P219 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CCDC88CQ9P219 AC244517.12-201ENST00000623581 663 ntBASIC2.03□□□□□ -2.08
CCDC88CQ9P219 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
CCDC88CQ9P219 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.03□□□□□ -2.09
CCDC88CQ9P219 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.02□□□□□ -2.09
CCDC88CQ9P219 AC012321.1-201ENST00000561622 1588 ntBASIC2.02□□□□□ -2.09
CCDC88CQ9P219 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
CCDC88CQ9P219 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC88CQ9P219 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.02□□□□□ -2.09
CCDC88CQ9P219 ZNF965P-201ENST00000432501 817 ntBASIC2.02□□□□□ -2.09
CCDC88CQ9P219 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.02□□□□□ -2.09
CCDC88CQ9P219 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC88CQ9P219 AL118520.1-201ENST00000450770 291 ntBASIC2.02□□□□□ -2.09
CCDC88CQ9P219 HGF-207ENST00000453018 721 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC88CQ9P219 GZMAP1-201ENST00000503054 631 ntBASIC2.02□□□□□ -2.09
CCDC88CQ9P219 AC008837.1-201ENST00000511513 412 ntBASIC2.02□□□□□ -2.09
CCDC88CQ9P219 RNU6-1073P-201ENST00000517182 106 ntBASIC2.02□□□□□ -2.09
CCDC88CQ9P219 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC88CQ9P219 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.02□□□□□ -2.09
CCDC88CQ9P219 KATNBL1P1-201ENST00000605192 748 ntBASIC2.02□□□□□ -2.09
CCDC88CQ9P219 AC016911.1-201ENST00000613297 452 ntBASIC2.02□□□□□ -2.09
CCDC88CQ9P219 AC020923.1-201ENST00000624021 917 ntBASIC2.02□□□□□ -2.09
CCDC88CQ9P219 UBE2V1P9-201ENST00000414760 368 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC88CQ9P219 AC096632.1-201ENST00000427395 310 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC88CQ9P219 AC098826.1-201ENST00000433943 471 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC88CQ9P219 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC88CQ9P219 OR10V3P-201ENST00000525712 725 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.01□□□□□ -2.09
CCDC88CQ9P219 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
CCDC88CQ9P219 AC067805.1-201ENST00000559344 470 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 ATP5F1P7-201ENST00000567330 760 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 DEFB122-202ENST00000569013 197 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.01□□□□□ -2.09
CCDC88CQ9P219 AP001542.1-201ENST00000591314 200 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 MIR6076-201ENST00000617521 113 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC88CQ9P219 AL109659.3-201ENST00000624985 950 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC88CQ9P219 AC131280.1-202ENST00000624067 4211 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CCDC88CQ9P219 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
CCDC88CQ9P219 SNORD114-1-201ENST00000362705 72 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 RNU6-173P-201ENST00000364215 104 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 MIR221-201ENST00000385135 110 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 MIR764-201ENST00000390811 85 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 PRRC2CP1-201ENST00000404428 159 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.01□□□□□ -2.09
CCDC88CQ9P219 TATDN1P1-201ENST00000414123 891 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 AC010881.1-201ENST00000433830 235 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 AC004866.2-201ENST00000438285 481 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.01□□□□□ -2.09
CCDC88CQ9P219 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC88CQ9P219 RPS23P3-201ENST00000470993 430 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 RPL37P25-201ENST00000507308 276 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 AC116337.1-201ENST00000509680 687 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 SNRPGP18-201ENST00000553000 214 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 AC135628.1-201ENST00000568867 534 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 AL109653.1-201ENST00000603091 248 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.01□□□□□ -2.09
CCDC88CQ9P219 Z82209.1-201ENST00000422141 2135 ntBASIC2.01□□□□□ -2.09
CCDC88CQ9P219 AC138915.1-201ENST00000565427 1685 ntBASIC2□□□□□ -2.09
CCDC88CQ9P219 RNU6-837P-201ENST00000391056 108 ntBASIC2□□□□□ -2.09
CCDC88CQ9P219 U3.37-201ENST00000408528 213 ntBASIC2□□□□□ -2.09
CCDC88CQ9P219 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC2□□□□□ -2.09
CCDC88CQ9P219 Z99714.1-201ENST00000450463 807 ntBASIC2□□□□□ -2.09
CCDC88CQ9P219 RPS24P6-201ENST00000452670 400 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms