Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 RWDD4P2-201ENST00000426392 563 ntBASIC4.28□□□□□ -1.72
COL20A1Q9P218 YME1L1P1-201ENST00000429435 297 ntBASIC4.28□□□□□ -1.72
COL20A1Q9P218 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL20A1Q9P218 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 RPS3AP17-201ENST00000472594 777 ntBASIC4.28□□□□□ -1.72
COL20A1Q9P218 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 RPL9P33-201ENST00000484311 566 ntBASIC4.28□□□□□ -1.72
COL20A1Q9P218 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 KCTD9P5-201ENST00000504141 1170 ntBASIC4.28□□□□□ -1.72
COL20A1Q9P218 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 AP003181.2-201ENST00000528941 181 ntBASIC4.28□□□□□ -1.72
COL20A1Q9P218 DEFB109D-201ENST00000529497 240 ntBASIC4.28□□□□□ -1.72
COL20A1Q9P218 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 COX6CP3-201ENST00000580869 223 ntBASIC4.28□□□□□ -1.72
COL20A1Q9P218 SNORD84-203ENST00000584275 78 ntBASIC4.28□□□□□ -1.72
COL20A1Q9P218 VN1R79P-201ENST00000593540 513 ntBASIC4.28□□□□□ -1.72
COL20A1Q9P218 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 AP003465.2-201ENST00000602571 373 ntBASIC4.28□□□□□ -1.72
COL20A1Q9P218 AC004908.2-201ENST00000609090 574 ntBASIC4.28□□□□□ -1.72
COL20A1Q9P218 AC128687.2-201ENST00000609657 566 ntBASIC4.28□□□□□ -1.72
COL20A1Q9P218 AC012150.2-201ENST00000621300 544 ntBASIC4.28□□□□□ -1.72
COL20A1Q9P218 AC095031.1-201ENST00000623685 672 ntBASIC4.28□□□□□ -1.72
COL20A1Q9P218 AC067931.1-201ENST00000624190 671 ntBASIC4.28□□□□□ -1.72
COL20A1Q9P218 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL20A1Q9P218 AC244258.1-201ENST00000637553 1071 ntBASIC4.28□□□□□ -1.72
COL20A1Q9P218 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL20A1Q9P218 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL20A1Q9P218 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL20A1Q9P218 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
COL20A1Q9P218 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL20A1Q9P218 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL20A1Q9P218 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
COL20A1Q9P218 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL20A1Q9P218 OR52B1P-201ENST00000316506 909 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 SNORA70.4-201ENST00000365509 134 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
COL20A1Q9P218 RPL23AP32-201ENST00000395315 459 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 AC068533.1-201ENST00000418542 415 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 PIGFP2-201ENST00000421400 651 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.27□□□□□ -1.73
COL20A1Q9P218 ISCA1P6-201ENST00000427740 390 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.27□□□□□ -1.73
COL20A1Q9P218 RPL35AP22-201ENST00000436855 335 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 CYCSP43-201ENST00000438233 310 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 RAC1P7-201ENST00000445367 377 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 AC010655.1-201ENST00000449336 292 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.27□□□□□ -1.73
COL20A1Q9P218 AL162388.1-201ENST00000450912 352 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 AC108059.3-201ENST00000456388 214 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.27□□□□□ -1.73
COL20A1Q9P218 snoU13.22-201ENST00000459428 104 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 RPL5P30-201ENST00000465511 891 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.27□□□□□ -1.73
COL20A1Q9P218 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.27□□□□□ -1.73
COL20A1Q9P218 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.27□□□□□ -1.73
COL20A1Q9P218 RNA5SP164-201ENST00000516533 110 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.27□□□□□ -1.73
COL20A1Q9P218 AL121603.1-201ENST00000553815 142 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.27□□□□□ -1.73
COL20A1Q9P218 AC006960.3-201ENST00000561845 705 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.27□□□□□ -1.73
COL20A1Q9P218 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.27□□□□□ -1.73
COL20A1Q9P218 KC877982.1-201ENST00000602313 470 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 AC008739.3-201ENST00000603262 127 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 AL158211.4-201ENST00000606988 584 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 OR6R2P-201ENST00000609216 300 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 AC108747.1-201ENST00000609508 535 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 AC069200.1-201ENST00000609511 323 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 AC244100.1-202ENST00000621554 382 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 AC138649.3-201ENST00000622154 254 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 AC112204.3-201ENST00000623822 332 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 AL159972.1-201ENST00000625150 448 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.27□□□□□ -1.73
COL20A1Q9P218 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.27□□□□□ -1.73
COL20A1Q9P218 OR5AK4P-201ENST00000635912 903 ntBASIC4.27□□□□□ -1.73
COL20A1Q9P218 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL20A1Q9P218 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.27□□□□□ -1.73
COL20A1Q9P218 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.27□□□□□ -1.73
COL20A1Q9P218 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.26□□□□□ -1.73
COL20A1Q9P218 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
COL20A1Q9P218 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL20A1Q9P218 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL20A1Q9P218 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL20A1Q9P218 AC087190.4-201ENST00000574616 8334 ntBASIC4.26□□□□□ -1.73
COL20A1Q9P218 Y_RNA.41-201ENST00000362646 102 ntBASIC4.26□□□□□ -1.73
COL20A1Q9P218 Y_RNA.296-201ENST00000364930 108 ntBASIC4.26□□□□□ -1.73
COL20A1Q9P218 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL20A1Q9P218 RPS3AP36-201ENST00000398190 775 ntBASIC4.26□□□□□ -1.73
COL20A1Q9P218 FCF1P9-201ENST00000412546 282 ntBASIC4.26□□□□□ -1.73
COL20A1Q9P218 MTCO3P12-201ENST00000416718 547 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms