Protein–RNA interactions for Protein: Q9NYV4

CDK12, Cyclin-dependent kinase 12, humanhuman

Predicted RBP Predictions only

Length 1,490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12Q9NYV4 SNORA31.11-201ENST00000516528 139 ntBASIC2.62□□□□□ -1.99
CDK12Q9NYV4 RNU6-250P-201ENST00000516958 103 ntBASIC2.62□□□□□ -1.99
CDK12Q9NYV4 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CDK12Q9NYV4 VN1R84P-201ENST00000593697 235 ntBASIC2.62□□□□□ -1.99
CDK12Q9NYV4 AL078603.1-201ENST00000603824 313 ntBASIC2.62□□□□□ -1.99
CDK12Q9NYV4 AC009314.1-201ENST00000603871 304 ntBASIC2.62□□□□□ -1.99
CDK12Q9NYV4 CFTRP2-201ENST00000634304 199 ntBASIC2.62□□□□□ -1.99
CDK12Q9NYV4 AC005336.3-201ENST00000623833 2679 ntBASIC2.62□□□□□ -1.99
CDK12Q9NYV4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CDK12Q9NYV4 AC093536.2-201ENST00000565257 1406 ntBASIC2.61□□□□□ -1.99
CDK12Q9NYV4 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
CDK12Q9NYV4 U3.15-201ENST00000365398 212 ntBASIC2.61□□□□□ -1.99
CDK12Q9NYV4 AL035405.1-201ENST00000400795 710 ntBASIC2.61□□□□□ -1.99
CDK12Q9NYV4 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.61□□□□□ -1.99
CDK12Q9NYV4 AC013404.1-201ENST00000413068 249 ntBASIC2.61□□□□□ -1.99
CDK12Q9NYV4 BX322784.1-201ENST00000455793 1077 ntBASIC2.61□□□□□ -1.99
CDK12Q9NYV4 RNU1-123P-201ENST00000458950 160 ntBASIC2.61□□□□□ -1.99
CDK12Q9NYV4 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.61□□□□□ -1.99
CDK12Q9NYV4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.61□□□□□ -1.99
CDK12Q9NYV4 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.61□□□□□ -1.99
CDK12Q9NYV4 MIR4716-201ENST00000579628 84 ntBASIC2.61□□□□□ -1.99
CDK12Q9NYV4 PSMA6P4-201ENST00000603247 718 ntBASIC2.61□□□□□ -1.99
CDK12Q9NYV4 AC009318.3-201ENST00000616916 503 ntBASIC2.61□□□□□ -1.99
CDK12Q9NYV4 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CDK12Q9NYV4 CKAP2P1-201ENST00000555477 2049 ntBASIC2.61□□□□□ -1.99
CDK12Q9NYV4 AL139811.1-201ENST00000424779 2299 ntBASIC2.61□□□□□ -1.99
CDK12Q9NYV4 RNA5SP167-201ENST00000365461 116 ntBASIC2.6□□□□□ -1.99
CDK12Q9NYV4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.6□□□□□ -1.99
CDK12Q9NYV4 AC023128.2-201ENST00000420880 1223 ntBASIC2.6□□□□□ -1.99
CDK12Q9NYV4 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.6□□□□□ -1.99
CDK12Q9NYV4 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.6□□□□□ -1.99
CDK12Q9NYV4 OR4P1P-201ENST00000530808 1136 ntBASIC2.6□□□□□ -1.99
CDK12Q9NYV4 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.6□□□□□ -1.99
CDK12Q9NYV4 MIR5089-201ENST00000580047 84 ntBASIC2.6□□□□□ -1.99
CDK12Q9NYV4 RPL23AP78-201ENST00000599928 470 ntBASIC2.6□□□□□ -1.99
CDK12Q9NYV4 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.6□□□□□ -1.99
CDK12Q9NYV4 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CDK12Q9NYV4 RNA5SP160-201ENST00000364866 120 ntBASIC2.59□□□□□ -1.99
CDK12Q9NYV4 RNA5SP37-201ENST00000365420 130 ntBASIC2.59□□□□□ -1.99
CDK12Q9NYV4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
CDK12Q9NYV4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.59□□□□□ -1.99
CDK12Q9NYV4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.59□□□□□ -1.99
CDK12Q9NYV4 CDC42P1-201ENST00000456658 548 ntBASIC2.59□□□□□ -1.99
CDK12Q9NYV4 RNU6-717P-201ENST00000459076 104 ntBASIC2.59□□□□□ -1.99
CDK12Q9NYV4 AC025033.1-201ENST00000463883 194 ntBASIC2.59□□□□□ -1.99
CDK12Q9NYV4 AC012170.1-201ENST00000495139 359 ntBASIC2.59□□□□□ -1.99
CDK12Q9NYV4 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC2.59□□□□□ -1.99
CDK12Q9NYV4 ARL4AP2-201ENST00000507378 601 ntBASIC2.59□□□□□ -1.99
CDK12Q9NYV4 RNA5SP102-201ENST00000516865 106 ntBASIC2.59□□□□□ -1.99
CDK12Q9NYV4 AL133393.1-201ENST00000603277 287 ntBASIC2.59□□□□□ -1.99
CDK12Q9NYV4 AL049779.4-201ENST00000604500 156 ntBASIC2.59□□□□□ -1.99
CDK12Q9NYV4 MIR6734-201ENST00000621166 68 ntBASIC2.59□□□□□ -1.99
CDK12Q9NYV4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.59□□□□□ -1.99
CDK12Q9NYV4 AC011978.2-201ENST00000569835 2054 ntBASIC2.59□□□□□ -1.99
CDK12Q9NYV4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CDK12Q9NYV4 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.59□□□□□ -2
CDK12Q9NYV4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
CDK12Q9NYV4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
CDK12Q9NYV4 Y_RNA.295-201ENST00000364918 102 ntBASIC2.58□□□□□ -2
CDK12Q9NYV4 Y_RNA.354-201ENST00000365448 111 ntBASIC2.58□□□□□ -2
CDK12Q9NYV4 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC2.58□□□□□ -2
CDK12Q9NYV4 AL021397.1-201ENST00000451806 248 ntBASIC2.58□□□□□ -2
CDK12Q9NYV4 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.58□□□□□ -2
CDK12Q9NYV4 AC087441.2-201ENST00000529141 262 ntBASIC2.58□□□□□ -2
CDK12Q9NYV4 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.58□□□□□ -2
CDK12Q9NYV4 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.58□□□□□ -2
CDK12Q9NYV4 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.58□□□□□ -2
CDK12Q9NYV4 SNRPGP19-201ENST00000603826 189 ntBASIC2.58□□□□□ -2
CDK12Q9NYV4 AC011468.4-201ENST00000603942 409 ntBASIC2.58□□□□□ -2
CDK12Q9NYV4 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.58□□□□□ -2
CDK12Q9NYV4 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CDK12Q9NYV4 DCAF13P1-201ENST00000495256 1330 ntBASIC2.58□□□□□ -2
CDK12Q9NYV4 RNU6-342P-201ENST00000384521 104 ntBASIC2.58□□□□□ -2
CDK12Q9NYV4 RNU2-37P-201ENST00000410695 177 ntBASIC2.58□□□□□ -2
CDK12Q9NYV4 AP000873.1-201ENST00000463987 400 ntBASIC2.58□□□□□ -2
CDK12Q9NYV4 AC007182.2-201ENST00000489251 402 ntBASIC2.58□□□□□ -2
CDK12Q9NYV4 RPS29P11-201ENST00000496507 171 ntBASIC2.58□□□□□ -2
CDK12Q9NYV4 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.58□□□□□ -2
CDK12Q9NYV4 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.58□□□□□ -2
CDK12Q9NYV4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.58□□□□□ -2
CDK12Q9NYV4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC2.58□□□□□ -2
CDK12Q9NYV4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.58□□□□□ -2
CDK12Q9NYV4 SETP2-201ENST00000553886 926 ntBASIC2.58□□□□□ -2
CDK12Q9NYV4 MIR4512-201ENST00000583257 77 ntBASIC2.58□□□□□ -2
CDK12Q9NYV4 AC098848.2-201ENST00000588023 330 ntBASIC2.58□□□□□ -2
CDK12Q9NYV4 AL035411.2-201ENST00000604022 421 ntBASIC2.58□□□□□ -2
CDK12Q9NYV4 AC004241.3-201ENST00000611728 517 ntBASIC2.58□□□□□ -2
CDK12Q9NYV4 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.58□□□□□ -2
CDK12Q9NYV4 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.58□□□□□ -2
CDK12Q9NYV4 AC110774.1-201ENST00000623567 2018 ntBASIC2.57□□□□□ -2
CDK12Q9NYV4 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.57□□□□□ -2
CDK12Q9NYV4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CDK12Q9NYV4 RNU6-1027P-201ENST00000383998 107 ntBASIC2.57□□□□□ -2
CDK12Q9NYV4 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDK12Q9NYV4 MTND4LP21-201ENST00000415303 295 ntBASIC2.57□□□□□ -2
CDK12Q9NYV4 RPS3AP9-201ENST00000417027 792 ntBASIC2.57□□□□□ -2
CDK12Q9NYV4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.57□□□□□ -2
CDK12Q9NYV4 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC2.57□□□□□ -2
CDK12Q9NYV4 AC022022.1-201ENST00000430304 178 ntBASIC2.57□□□□□ -2
CDK12Q9NYV4 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms