Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 AC005776.1-201ENST00000603164 290 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AC005000.2-201ENST00000605468 310 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AL512506.2-201ENST00000624472 458 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AC091925.2-201ENST00000625059 256 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 AP000526.1-201ENST00000603308 1388 ntBASIC2.6□□□□□ -1.99
TREX1Q9NSU2 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
TREX1Q9NSU2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.59□□□□□ -1.99
TREX1Q9NSU2 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TREX1Q9NSU2 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
TREX1Q9NSU2 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
TREX1Q9NSU2 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.59□□□□□ -1.99
TREX1Q9NSU2 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.59□□□□□ -1.99
TREX1Q9NSU2 GNG5P1-201ENST00000255500 204 ntBASIC2.59□□□□□ -1.99
TREX1Q9NSU2 RNU6-173P-201ENST00000364215 104 ntBASIC2.59□□□□□ -1.99
TREX1Q9NSU2 U3.29-201ENST00000391296 212 ntBASIC2.59□□□□□ -1.99
TREX1Q9NSU2 AC016769.3-201ENST00000396562 315 ntBASIC2.59□□□□□ -1.99
TREX1Q9NSU2 FO393414.1-201ENST00000428697 1184 ntBASIC2.59□□□□□ -1.99
TREX1Q9NSU2 RPS3AP14-201ENST00000483907 780 ntBASIC2.59□□□□□ -1.99
TREX1Q9NSU2 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.59□□□□□ -1.99
TREX1Q9NSU2 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.59□□□□□ -1.99
TREX1Q9NSU2 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.59□□□□□ -1.99
TREX1Q9NSU2 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.59□□□□□ -1.99
TREX1Q9NSU2 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
TREX1Q9NSU2 CBX3P3-201ENST00000508108 532 ntBASIC2.59□□□□□ -1.99
TREX1Q9NSU2 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.59□□□□□ -1.99
TREX1Q9NSU2 AP000889.1-201ENST00000530968 660 ntBASIC2.59□□□□□ -1.99
TREX1Q9NSU2 AP001317.1-201ENST00000531194 960 ntBASIC2.59□□□□□ -1.99
TREX1Q9NSU2 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.59□□□□□ -1.99
TREX1Q9NSU2 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC2.59□□□□□ -1.99
TREX1Q9NSU2 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.59□□□□□ -1.99
TREX1Q9NSU2 AC007336.1-201ENST00000576365 3828 ntBASIC2.59□□□□□ -1.99
TREX1Q9NSU2 AC008739.2-201ENST00000597006 317 ntBASIC2.59□□□□□ -1.99
TREX1Q9NSU2 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.59□□□□□ -1.99
TREX1Q9NSU2 VN1R92P-201ENST00000598511 928 ntBASIC2.59□□□□□ -1.99
TREX1Q9NSU2 BNIP3P19-201ENST00000605397 577 ntBASIC2.59□□□□□ -1.99
TREX1Q9NSU2 AC135507.2-201ENST00000612443 309 ntBASIC2.59□□□□□ -1.99
TREX1Q9NSU2 AL512506.1-201ENST00000613918 449 ntBASIC2.59□□□□□ -1.99
TREX1Q9NSU2 AC078880.5-201ENST00000617845 421 ntBASIC2.59□□□□□ -1.99
TREX1Q9NSU2 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.59□□□□□ -1.99
TREX1Q9NSU2 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.59□□□□□ -1.99
TREX1Q9NSU2 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.59□□□□□ -1.99
TREX1Q9NSU2 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.59□□□□□ -1.99
TREX1Q9NSU2 ZNF519P1-201ENST00000449011 1626 ntBASIC2.59□□□□□ -1.99
TREX1Q9NSU2 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -2
TREX1Q9NSU2 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
TREX1Q9NSU2 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.58□□□□□ -2
TREX1Q9NSU2 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.58□□□□□ -2
TREX1Q9NSU2 MIR627-201ENST00000384979 97 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 MIR634-201ENST00000385208 97 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.58□□□□□ -2
TREX1Q9NSU2 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.58□□□□□ -2
TREX1Q9NSU2 AC241584.1-201ENST00000438469 1241 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 AC000041.1-201ENST00000439655 175 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.58□□□□□ -2
TREX1Q9NSU2 AC234775.1-201ENST00000454247 670 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 AC133134.1-201ENST00000466800 359 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.58□□□□□ -2
TREX1Q9NSU2 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.58□□□□□ -2
TREX1Q9NSU2 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 AP003049.1-201ENST00000529418 457 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 AC090502.2-201ENST00000549267 280 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 AC008127.2-201ENST00000549925 1075 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 ZNF971P-201ENST00000562068 1249 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 SULT1C2P1-202ENST00000562418 459 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 MIR5092-201ENST00000583139 88 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.58□□□□□ -2
TREX1Q9NSU2 AC079089.3-201ENST00000603094 673 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 RPAP2P1-201ENST00000603626 1168 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 AP003973.1-201ENST00000604639 691 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 AL137843.1-201ENST00000605078 385 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 AC092954.1-201ENST00000609121 445 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 AL161734.1-201ENST00000609720 557 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 AL359198.2-201ENST00000611836 194 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.58□□□□□ -2
TREX1Q9NSU2 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.58□□□□□ -2
TREX1Q9NSU2 GDI2P1-201ENST00000429312 1336 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 AL512283.1-201ENST00000606756 1384 ntBASIC2.58□□□□□ -2
TREX1Q9NSU2 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
TREX1Q9NSU2 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.57□□□□□ -2
TREX1Q9NSU2 RNU6-859P-201ENST00000362728 107 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 RNU6-839P-201ENST00000363347 108 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.57□□□□□ -2
TREX1Q9NSU2 MIR493-201ENST00000385254 89 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 ARF4P3-201ENST00000397387 509 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 AL356057.2-201ENST00000403318 432 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 RNU2-15P-201ENST00000410692 191 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.57□□□□□ -2
TREX1Q9NSU2 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.57□□□□□ -2
TREX1Q9NSU2 RPS15AP38-201ENST00000413110 372 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 BOLA3P4-201ENST00000418151 400 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 RPL7P30-201ENST00000420888 709 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 MTCO3P1-205ENST00000422088 832 ntBASIC2.57□□□□□ -2
TREX1Q9NSU2 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms