Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 SNRPEP7-201ENST00000438350 220 ntBASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 AL008629.1-201ENST00000438615 184 ntBASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 AL591503.2-201ENST00000442314 1005 ntBASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 NOTCH2P1-201ENST00000443481 624 ntBASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 USP9YP10-201ENST00000454868 628 ntBASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 snoU13.8-201ENST00000458890 104 ntBASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 RPS27AP1-201ENST00000475545 471 ntBASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 AC012181.1-201ENST00000479895 423 ntBASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 RN7SL20P-201ENST00000488827 297 ntBASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 AL024509.2-201ENST00000493462 493 ntBASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 AC017037.2-201ENST00000513850 890 ntBASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 AP000857.1-201ENST00000532151 543 ntBASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 AC018630.1-201ENST00000541376 925 ntBASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 OR8R1P-201ENST00000543943 764 ntBASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 AL163153.1-201ENST00000554223 283 ntBASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 AC007224.1-201ENST00000564410 144 ntBASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 MIR4697-201ENST00000582977 78 ntBASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 AL022099.1-201ENST00000604551 712 ntBASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 AC009039.2-201ENST00000624524 529 ntBASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 AL136164.4-201ENST00000625013 2135 ntBASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
VIPAS39Q9H9C1 ASNSP3-201ENST00000451989 1306 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 FAM35CP-201ENST00000554755 2470 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 RPL21P132-201ENST00000331267 462 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 RNU6-1155P-201ENST00000363554 107 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 RN7SKP227-201ENST00000364445 330 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 RNU6-723P-201ENST00000383973 107 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 RNU6-1207P-201ENST00000384343 107 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 TAS2R15P-201ENST00000390674 928 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 AC099677.1-201ENST00000420575 175 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 RAC1P7-201ENST00000445367 377 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 PAXBP1P1-201ENST00000449315 447 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 RBMY2UP-201ENST00000453474 324 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 AL139824.2-201ENST00000458731 1095 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 RPL9P33-201ENST00000484311 566 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 VN1R105P-201ENST00000486595 910 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 AC034159.1-201ENST00000513885 583 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 RNU6-714P-201ENST00000516963 103 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 AC009094.1-201ENST00000564443 426 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 AC005951.1-201ENST00000576706 485 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 MIR4474-201ENST00000579189 78 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 MIR2682-201ENST00000580305 110 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 SNORD84-203ENST00000584275 78 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 VN1R90P-201ENST00000595717 726 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 Z99289.3-201ENST00000605586 594 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 AC024560.3-201ENST00000608482 349 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 AL590240.3-201ENST00000621416 943 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 AC095031.1-201ENST00000623685 672 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 RNA5SP196-201ENST00000625967 102 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 DDX43P2-201ENST00000604753 1354 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.19□□□□□ -1.9
VIPAS39Q9H9C1 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 AL035425.3-201ENST00000564206 4996 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 AP003122.5-201ENST00000527668 3766 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 RNU6-433P-201ENST00000363216 104 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 RNU6-744P-201ENST00000365557 107 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 RNA5SP283-201ENST00000365604 119 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 DEFB109C-201ENST00000382575 264 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 DEFB109B-201ENST00000382656 264 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 RNU6-1316P-201ENST00000384242 108 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 AC110754.1-201ENST00000399740 601 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 AL590084.2-201ENST00000401481 382 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 RAP1BP1-201ENST00000412709 553 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 AC098592.1-201ENST00000419352 333 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 DUTP6-201ENST00000425573 462 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 AC073387.1-201ENST00000453261 709 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 RPL21P13-201ENST00000488305 481 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 CBX3P3-201ENST00000508108 532 ntBASIC3.18□□□□□ -1.9
VIPAS39Q9H9C1 LTV1P1-201ENST00000510683 1237 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 146.6 ms