Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.25□□□□□ -1.89
RNF41Q9H4P4 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
RNF41Q9H4P4 AC079600.2-201ENST00000550076 130 ntBASIC3.25□□□□□ -1.89
RNF41Q9H4P4 GTF3AP2-201ENST00000557014 266 ntBASIC3.25□□□□□ -1.89
RNF41Q9H4P4 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.25□□□□□ -1.89
RNF41Q9H4P4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.25□□□□□ -1.89
RNF41Q9H4P4 VN1R92P-201ENST00000598511 928 ntBASIC3.25□□□□□ -1.89
RNF41Q9H4P4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.25□□□□□ -1.89
RNF41Q9H4P4 AC231759.1-201ENST00000616455 597 ntBASIC3.25□□□□□ -1.89
RNF41Q9H4P4 AC009318.4-201ENST00000620496 486 ntBASIC3.25□□□□□ -1.89
RNF41Q9H4P4 AC092184.1-201ENST00000625042 715 ntBASIC3.25□□□□□ -1.89
RNF41Q9H4P4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.89
RNF41Q9H4P4 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.24□□□□□ -1.89
RNF41Q9H4P4 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
RNF41Q9H4P4 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.24□□□□□ -1.89
RNF41Q9H4P4 CDR1-202ENST00000625883 1485 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
RNF41Q9H4P4 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.24□□□□□ -1.89
RNF41Q9H4P4 AP000568.1-201ENST00000282964 442 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 SNORA31-201ENST00000362607 130 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 Y_RNA.465-201ENST00000384293 102 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 MIR591-201ENST00000385290 95 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 ANAPC10P1-201ENST00000395991 556 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 EIF5P1-201ENST00000400019 1231 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 AL024474.1-201ENST00000404655 591 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 HSPE1P26-201ENST00000405341 275 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 AC244098.2-201ENST00000422068 99 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
RNF41Q9H4P4 TRIAP1P1-201ENST00000427062 225 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 ATP5F1P1-201ENST00000433775 569 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 MTCYBP11-201ENST00000447254 1109 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.24□□□□□ -1.89
RNF41Q9H4P4 Z73417.1-201ENST00000447373 778 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 RPL21P134-201ENST00000453468 483 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 RPL18AP17-201ENST00000455326 198 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.24□□□□□ -1.89
RNF41Q9H4P4 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.24□□□□□ -1.89
RNF41Q9H4P4 AC092757.1-201ENST00000467293 467 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.24□□□□□ -1.89
RNF41Q9H4P4 OR4G11P-201ENST00000492842 939 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.24□□□□□ -1.89
RNF41Q9H4P4 AC104986.1-201ENST00000517978 436 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 MRPS36P3-201ENST00000519284 130 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 COX6CP8-201ENST00000522620 226 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.24□□□□□ -1.89
RNF41Q9H4P4 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.24□□□□□ -1.89
RNF41Q9H4P4 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.24□□□□□ -1.89
RNF41Q9H4P4 NBEAP1-201ENST00000554452 979 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.24□□□□□ -1.89
RNF41Q9H4P4 AC107954.1-201ENST00000565906 727 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 AC106782.4-201ENST00000568264 210 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.24□□□□□ -1.89
RNF41Q9H4P4 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.24□□□□□ -1.89
RNF41Q9H4P4 ATP1B3P1-201ENST00000605365 821 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 AC080013.3-201ENST00000606839 578 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.24□□□□□ -1.89
RNF41Q9H4P4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.24□□□□□ -1.89
RNF41Q9H4P4 AC073968.1-201ENST00000618594 637 ntBASIC3.24□□□□□ -1.89
RNF41Q9H4P4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.24□□□□□ -1.89
RNF41Q9H4P4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
RNF41Q9H4P4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC3.24□□□□□ -1.89
RNF41Q9H4P4 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 RNU4-28P-201ENST00000364739 141 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 RNA5SP189-201ENST00000364920 115 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 RNU6-83P-201ENST00000384568 112 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AL360182.1-201ENST00000397433 468 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AL512633.1-201ENST00000399931 655 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AL592148.1-201ENST00000413568 445 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AL139281.1-201ENST00000422120 335 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AC006548.1-201ENST00000427470 102 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 FGF7P5-201ENST00000441829 291 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 RPL39P6-201ENST00000448289 150 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AL445669.2-201ENST00000454425 421 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AC104090.1-201ENST00000506341 1171 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 HMGB3P15-201ENST00000507326 574 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AC116353.3-201ENST00000511215 249 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AP000857.1-201ENST00000532151 543 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AC007954.1-201ENST00000554198 494 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 OR4T1P-201ENST00000554933 911 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AC245036.5-201ENST00000596330 847 ntBASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.23□□□□□ -1.89
RNF41Q9H4P4 AL137843.1-201ENST00000605078 385 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 112.6 ms