Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.04□□□□□ -1.92
POLR1EQ9GZS1 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.04□□□□□ -1.92
POLR1EQ9GZS1 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC3.04□□□□□ -1.92
POLR1EQ9GZS1 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.04□□□□□ -1.92
POLR1EQ9GZS1 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.04□□□□□ -1.92
POLR1EQ9GZS1 AC105224.1-201ENST00000587055 421 ntBASIC3.04□□□□□ -1.92
POLR1EQ9GZS1 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.04□□□□□ -1.92
POLR1EQ9GZS1 AC004853.1-201ENST00000604902 698 ntBASIC3.04□□□□□ -1.92
POLR1EQ9GZS1 AC069545.1-201ENST00000605671 358 ntBASIC3.04□□□□□ -1.92
POLR1EQ9GZS1 AC007318.2-201ENST00000620999 243 ntBASIC3.04□□□□□ -1.92
POLR1EQ9GZS1 AC090772.4-201ENST00000623599 362 ntBASIC3.04□□□□□ -1.92
POLR1EQ9GZS1 AC120349.2-201ENST00000625002 298 ntBASIC3.04□□□□□ -1.92
POLR1EQ9GZS1 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
POLR1EQ9GZS1 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.04□□□□□ -1.92
POLR1EQ9GZS1 AP005901.5-201ENST00000545779 1796 ntBASIC3.04□□□□□ -1.92
POLR1EQ9GZS1 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
POLR1EQ9GZS1 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
POLR1EQ9GZS1 AC091564.4-201ENST00000533934 2194 ntBASIC3.04□□□□□ -1.92
POLR1EQ9GZS1 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 AL035425.3-201ENST00000564206 4996 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 AL356473.1-201ENST00000406203 1408 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 RPL23AP57-201ENST00000332361 466 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 RNA5SP387-201ENST00000364226 106 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 U8.9-201ENST00000365667 134 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 RPL21P3-201ENST00000395517 478 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 GTF2IP7-202ENST00000436677 309 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 RPL21P2-201ENST00000440049 481 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 AC146507.2-201ENST00000460608 476 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 TMEM251P1-201ENST00000503717 318 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 AC022483.1-201ENST00000514020 567 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 RN7SKP43-201ENST00000516173 320 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 HSPA8P13-201ENST00000523715 472 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 AC118942.1-201ENST00000529674 1035 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 AL157394.1-201ENST00000562983 1224 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 MIR3912-201ENST00000577566 105 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 MIR4325-201ENST00000583049 90 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 AL022067.1-201ENST00000602426 454 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 AC024060.1-201ENST00000607052 494 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 AC009237.15-201ENST00000610252 501 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 AC243773.3-201ENST00000613270 256 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 AC025588.4-201ENST00000615802 908 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 AL049777.1-201ENST00000622740 518 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 AP003122.5-201ENST00000527668 3766 ntBASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.03□□□□□ -1.92
POLR1EQ9GZS1 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 AC092435.3-201ENST00000565538 3654 ntBASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 AC000403.1-201ENST00000613696 3585 ntBASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 Y_RNA.333-201ENST00000365274 102 ntBASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 RNU6-224P-201ENST00000384055 107 ntBASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 RPS3AP24-201ENST00000407896 734 ntBASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 AL450338.1-201ENST00000407987 512 ntBASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 SAR1AP4-201ENST00000429225 591 ntBASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 RPL23AP58-201ENST00000440453 469 ntBASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 AC010099.1-201ENST00000455434 375 ntBASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 RN7SL75P-201ENST00000461926 281 ntBASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 SETP11-201ENST00000473027 690 ntBASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 RPS29P2-201ENST00000479278 136 ntBASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 AC114981.1-201ENST00000503897 678 ntBASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 AC147055.4-201ENST00000504399 745 ntBASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 AC114322.1-201ENST00000506771 926 ntBASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 RNA5SP341-201ENST00000516261 117 ntBASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 AC107016.2-201ENST00000547968 190 ntBASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 BNIP3P22-201ENST00000593399 556 ntBASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
POLR1EQ9GZS1 AC018645.2-201ENST00000609151 472 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms