Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 NAMPTP2-201ENST00000505629 1115 ntBASIC3.18□□□□□ -1.9
RPAP1Q9BWH6 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.18□□□□□ -1.9
RPAP1Q9BWH6 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.18□□□□□ -1.9
RPAP1Q9BWH6 MTCO2P32-201ENST00000514865 403 ntBASIC3.18□□□□□ -1.9
RPAP1Q9BWH6 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.18□□□□□ -1.9
RPAP1Q9BWH6 MIR4666A-201ENST00000580160 79 ntBASIC3.18□□□□□ -1.9
RPAP1Q9BWH6 AC090330.1-201ENST00000588646 764 ntBASIC3.18□□□□□ -1.9
RPAP1Q9BWH6 AP001542.2-201ENST00000593141 364 ntBASIC3.18□□□□□ -1.9
RPAP1Q9BWH6 AP000943.4-201ENST00000622912 357 ntBASIC3.18□□□□□ -1.9
RPAP1Q9BWH6 AC006927.2-201ENST00000639256 389 ntBASIC3.18□□□□□ -1.9
RPAP1Q9BWH6 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.18□□□□□ -1.9
RPAP1Q9BWH6 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.18□□□□□ -1.9
RPAP1Q9BWH6 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPAP1Q9BWH6 AC004925.1-201ENST00000624256 2706 ntBASIC3.18□□□□□ -1.9
RPAP1Q9BWH6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RPAP1Q9BWH6 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 RNU6-839P-201ENST00000363347 108 ntBASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 SNORA40.4-201ENST00000390971 128 ntBASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 AL133264.1-201ENST00000407157 562 ntBASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 AC027644.1-201ENST00000419595 298 ntBASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 AL513175.2-201ENST00000422071 443 ntBASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 MTCYBP32-201ENST00000427945 1084 ntBASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 AC241584.1-201ENST00000438469 1241 ntBASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 AC093801.2-201ENST00000503966 1050 ntBASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 RNA5SP148-201ENST00000516527 94 ntBASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 AC087481.2-201ENST00000565492 330 ntBASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 AC023825.1-201ENST00000566704 1030 ntBASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 MIR4635-201ENST00000583759 79 ntBASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 AC079089.3-201ENST00000603094 673 ntBASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 AP003973.1-201ENST00000604639 691 ntBASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 AP000238.1-201ENST00000608759 426 ntBASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 AP005137.2-201ENST00000609238 400 ntBASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 AC018926.1-201ENST00000616335 435 ntBASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 AC090617.7-201ENST00000623952 126 ntBASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 AL512506.2-201ENST00000624472 458 ntBASIC3.17□□□□□ -1.9
RPAP1Q9BWH6 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 AC111188.2-201ENST00000529697 1387 ntBASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 RNU5B-4P-201ENST00000363508 111 ntBASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 RNU6-821P-201ENST00000390995 107 ntBASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 AL136133.1-201ENST00000413694 376 ntBASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 AC109583.1-201ENST00000432156 268 ntBASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 FDX1P2-201ENST00000450769 375 ntBASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 AC133134.1-201ENST00000466800 359 ntBASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 VPS26AP1-201ENST00000483197 979 ntBASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 AC092902.1-201ENST00000486999 259 ntBASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 AC098799.2-201ENST00000509466 868 ntBASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 RNA5SP24-201ENST00000516478 95 ntBASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 snoZ278.1-201ENST00000517059 112 ntBASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 AP001646.1-201ENST00000527936 915 ntBASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 AP001317.1-201ENST00000531194 960 ntBASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 AC064859.1-201ENST00000624741 174 ntBASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 DBF4P1-201ENST00000412976 1892 ntBASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 AC010733.2-201ENST00000589496 5702 ntBASIC3.16□□□□□ -1.9
RPAP1Q9BWH6 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 SNORA51.6-201ENST00000384151 125 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 MIR217-201ENST00000384817 110 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 MTND4P13-201ENST00000402078 1023 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 RPL23AP47-201ENST00000408017 460 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 AC013262.1-201ENST00000426710 252 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 AC092634.2-201ENST00000428146 1010 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 RPS20P24-201ENST00000457473 361 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 RPL21P104-201ENST00000464143 478 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 HMGB1P25-201ENST00000468402 607 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 MTCO3P35-201ENST00000485582 781 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 AC004062.1-201ENST00000509926 645 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 AC008413.1-201ENST00000511864 177 ntBASIC3.15□□□□□ -1.9
RPAP1Q9BWH6 AC023632.1-201ENST00000518463 375 ntBASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms