Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC28BQ9BUN5 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC28BQ9BUN5 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC28BQ9BUN5 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC28BQ9BUN5 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.13□□□□□ -1.91
CCDC28BQ9BUN5 RN7SKP13-201ENST00000515933 244 ntBASIC3.13□□□□□ -1.91
CCDC28BQ9BUN5 RNU6-759P-201ENST00000516740 103 ntBASIC3.13□□□□□ -1.91
CCDC28BQ9BUN5 TRMT10BP1-201ENST00000519377 943 ntBASIC3.13□□□□□ -1.91
CCDC28BQ9BUN5 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC28BQ9BUN5 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC28BQ9BUN5 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC28BQ9BUN5 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.13□□□□□ -1.91
CCDC28BQ9BUN5 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC28BQ9BUN5 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.13□□□□□ -1.91
CCDC28BQ9BUN5 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.13□□□□□ -1.91
CCDC28BQ9BUN5 SNRPGP15-201ENST00000600149 222 ntBASIC3.13□□□□□ -1.91
CCDC28BQ9BUN5 AL357080.1-201ENST00000617394 239 ntBASIC3.13□□□□□ -1.91
CCDC28BQ9BUN5 AC073968.1-201ENST00000618594 637 ntBASIC3.13□□□□□ -1.91
CCDC28BQ9BUN5 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.13□□□□□ -1.91
CCDC28BQ9BUN5 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCDC28BQ9BUN5 AF117829.1-206ENST00000621883 3802 ntBASIC3.13□□□□□ -1.91
CCDC28BQ9BUN5 NUP58P1-201ENST00000502546 1738 ntBASIC3.13□□□□□ -1.91
CCDC28BQ9BUN5 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 AC097714.1-201ENST00000511272 1647 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 RNU4-35P-201ENST00000362588 141 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 RNVU1-3-201ENST00000364313 161 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 Y_RNA.302-201ENST00000364997 102 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 SNORD82-201ENST00000365530 70 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 AL121972.1-201ENST00000402023 252 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 MTND4LP20-201ENST00000402379 270 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 AL357075.1-201ENST00000404107 726 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 TPMTP2-201ENST00000414372 726 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 FNDC3CP-201ENST00000420795 1155 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 RPL7P30-201ENST00000420888 709 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 Z99497.1-201ENST00000421282 135 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 AC019178.2-201ENST00000423595 505 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 AC005517.2-201ENST00000424673 553 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 MTND1P20-201ENST00000430341 950 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 RPS12P18-201ENST00000442381 270 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 NOTCH2P1-201ENST00000443481 624 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 SUMO2P2-201ENST00000456482 255 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 MEMO1P3-201ENST00000459811 302 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 AC072039.1-201ENST00000477611 581 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 AC025518.1-201ENST00000479856 347 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 FAM172BP-201ENST00000487497 1089 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 RNU6-150P-201ENST00000516237 95 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 AC022861.1-201ENST00000522981 663 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 AC087276.1-201ENST00000529659 480 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 AL356057.1-201ENST00000533798 831 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 AC007224.1-201ENST00000564410 144 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 MTCO3P24-201ENST00000572729 782 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 AC025588.3-201ENST00000604182 274 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 Z94722.1-201ENST00000604328 474 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 AL157817.1-201ENST00000614264 790 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 AF246928.1-201ENST00000623768 87 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 MIR6733-201ENST00000635723 61 ntBASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCDC28BQ9BUN5 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 AC068538.1-201ENST00000376856 336 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 RNU6-723P-201ENST00000383973 107 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 RNU6-339P-201ENST00000384310 107 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 DHFRP6-201ENST00000401776 268 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 RNU2-71P-201ENST00000411395 189 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 AC016769.2-201ENST00000414815 475 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 MTCYBP24-201ENST00000420387 1106 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 MTCO2P5-201ENST00000422621 426 ntBASIC3.11□□□□□ -1.91
CCDC28BQ9BUN5 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms