Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 TMEM167AP1-201ENST00000423409 219 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.6□□□□□ -1.99
FOXC2Q99958 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 HSFY7P-201ENST00000432672 318 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 RPL23AP74-201ENST00000437246 471 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 HSFY8P-201ENST00000437934 318 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC2.6□□□□□ -1.99
FOXC2Q99958 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.6□□□□□ -1.99
FOXC2Q99958 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.6□□□□□ -1.99
FOXC2Q99958 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC2.6□□□□□ -1.99
FOXC2Q99958 AC093392.2-201ENST00000450682 337 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 HSFY5P-201ENST00000453726 309 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC2.6□□□□□ -1.99
FOXC2Q99958 HMGN1P18-201ENST00000457642 277 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 AC092757.1-201ENST00000467293 467 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 COX7A2P2-201ENST00000505291 250 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 AC010460.2-201ENST00000509054 677 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.6□□□□□ -1.99
FOXC2Q99958 RN7SKP132-201ENST00000516001 208 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 AC239860.2-201ENST00000525886 270 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
FOXC2Q99958 AC087894.1-201ENST00000538359 518 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 AC107016.2-201ENST00000547968 190 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 BNIP3P24-201ENST00000593398 557 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.6□□□□□ -1.99
FOXC2Q99958 AL035411.2-201ENST00000604022 421 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 PRELID3BP8-201ENST00000604148 295 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 AL035413.2-201ENST00000604801 525 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 AC026790.2-201ENST00000606282 430 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 AC004832.5-201ENST00000608677 401 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 AF129408.1-201ENST00000608767 431 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 AP002826.1-201ENST00000608835 315 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 AL512427.1-201ENST00000618593 349 ntBASIC2.6□□□□□ -1.99
FOXC2Q99958 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.6□□□□□ -1.99
FOXC2Q99958 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
FOXC2Q99958 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.6□□□□□ -1.99
FOXC2Q99958 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.6□□□□□ -1.99
FOXC2Q99958 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
FOXC2Q99958 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.6□□□□□ -1.99
FOXC2Q99958 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.6□□□□□ -1.99
FOXC2Q99958 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.59□□□□□ -1.99
FOXC2Q99958 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.59□□□□□ -1.99
FOXC2Q99958 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.59□□□□□ -1.99
FOXC2Q99958 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
FOXC2Q99958 AC092435.3-201ENST00000565538 3654 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 AC004972.1-201ENST00000623934 2209 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 CD2-201ENST00000369477 478 ntTSL 2 BASIC2.59□□□□□ -1.99
FOXC2Q99958 SNORA70B-201ENST00000384210 135 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 RNU6-882P-201ENST00000391025 103 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 RNU6-1000P-201ENST00000391066 106 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 AL355143.1-201ENST00000407101 841 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 RNU2-47P-201ENST00000410649 186 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 AC096533.1-201ENST00000411645 353 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 NPM1P11-201ENST00000417106 855 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 USP9YP21-201ENST00000420603 432 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC2.59□□□□□ -1.99
FOXC2Q99958 MUPP-201ENST00000438111 566 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.59□□□□□ -1.99
FOXC2Q99958 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.59□□□□□ -1.99
FOXC2Q99958 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC2.59□□□□□ -1.99
FOXC2Q99958 AC108938.1-201ENST00000451204 136 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 AC244505.3-201ENST00000454598 187 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 Y_RNA.638-201ENST00000459374 113 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 KCTD9P5-201ENST00000504141 1170 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.59□□□□□ -1.99
FOXC2Q99958 SNORA64.4-201ENST00000516632 81 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC2.59□□□□□ -1.99
FOXC2Q99958 OR10V3P-201ENST00000525712 725 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.59□□□□□ -1.99
FOXC2Q99958 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
FOXC2Q99958 AC055876.1-202ENST00000567053 138 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 AC245036.5-201ENST00000596330 847 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 HSPE1P7-201ENST00000604681 321 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 AL583856.2-201ENST00000606298 543 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 AC022306.3-201ENST00000619930 550 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 MIR7843-201ENST00000622274 79 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 U6.101-201ENST00000637707 76 ntBASIC2.59□□□□□ -1.99
FOXC2Q99958 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
FOXC2Q99958 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.59□□□□□ -2
FOXC2Q99958 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.59□□□□□ -2
FOXC2Q99958 OR4G11P-202ENST00000642116 1414 ntBASIC2.59□□□□□ -2
FOXC2Q99958 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -2
FOXC2Q99958 AC091564.4-201ENST00000533934 2194 ntBASIC2.59□□□□□ -2
FOXC2Q99958 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.58□□□□□ -2
FOXC2Q99958 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.58□□□□□ -2
FOXC2Q99958 RNA5SP383-201ENST00000362934 120 ntBASIC2.58□□□□□ -2
FOXC2Q99958 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.58□□□□□ -2
FOXC2Q99958 AL031679.1-201ENST00000400616 525 ntBASIC2.58□□□□□ -2
FOXC2Q99958 RNA5SP293-201ENST00000410527 113 ntBASIC2.58□□□□□ -2
FOXC2Q99958 RNA5SP31-201ENST00000411144 127 ntBASIC2.58□□□□□ -2
FOXC2Q99958 RPS7P9-201ENST00000414704 586 ntBASIC2.58□□□□□ -2
FOXC2Q99958 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.58□□□□□ -2
FOXC2Q99958 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.58□□□□□ -2
FOXC2Q99958 BEND7P1-201ENST00000422058 457 ntBASIC2.58□□□□□ -2
FOXC2Q99958 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.58□□□□□ -2
FOXC2Q99958 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.58□□□□□ -2
FOXC2Q99958 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.58□□□□□ -2
FOXC2Q99958 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.58□□□□□ -2
FOXC2Q99958 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms