Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 MTND1P4-201ENST00000435196 415 ntBASIC3.78□□□□□ -1.8
NPAS1Q99742 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.78□□□□□ -1.8
NPAS1Q99742 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.78□□□□□ -1.8
NPAS1Q99742 MTND1P12-201ENST00000455231 147 ntBASIC3.78□□□□□ -1.8
NPAS1Q99742 MTCO2P29-201ENST00000465212 189 ntBASIC3.78□□□□□ -1.8
NPAS1Q99742 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPAS1Q99742 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.78□□□□□ -1.8
NPAS1Q99742 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.78□□□□□ -1.8
NPAS1Q99742 AC114967.1-201ENST00000504890 259 ntBASIC3.78□□□□□ -1.8
NPAS1Q99742 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.78□□□□□ -1.8
NPAS1Q99742 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NPAS1Q99742 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.78□□□□□ -1.8
NPAS1Q99742 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.78□□□□□ -1.8
NPAS1Q99742 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.78□□□□□ -1.8
NPAS1Q99742 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.78□□□□□ -1.8
NPAS1Q99742 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.78□□□□□ -1.8
NPAS1Q99742 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.78□□□□□ -1.8
NPAS1Q99742 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
NPAS1Q99742 AL590282.1-201ENST00000610379 1136 ntBASIC3.78□□□□□ -1.8
NPAS1Q99742 MIR6716-201ENST00000613413 80 ntBASIC3.78□□□□□ -1.8
NPAS1Q99742 U6atac.1-201ENST00000616025 117 ntBASIC3.78□□□□□ -1.8
NPAS1Q99742 MIR6130-201ENST00000619419 109 ntBASIC3.78□□□□□ -1.8
NPAS1Q99742 MIR8059-201ENST00000620427 81 ntBASIC3.78□□□□□ -1.8
NPAS1Q99742 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.78□□□□□ -1.8
NPAS1Q99742 MFSD8-242ENST00000641690 4199 ntBASIC3.78□□□□□ -1.8
NPAS1Q99742 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
NPAS1Q99742 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
NPAS1Q99742 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
NPAS1Q99742 AL157700.1-201ENST00000561973 1432 ntBASIC3.78□□□□□ -1.8
NPAS1Q99742 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
NPAS1Q99742 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
NPAS1Q99742 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.77□□□□□ -1.81
NPAS1Q99742 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.77□□□□□ -1.81
NPAS1Q99742 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.77□□□□□ -1.81
NPAS1Q99742 SNORA37-201ENST00000384504 129 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NPAS1Q99742 RPL7P60-201ENST00000397636 735 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 RPS3AP24-201ENST00000407896 734 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 RNU4-55P-201ENST00000410731 137 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 RPL7AP73-201ENST00000413490 353 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 RPL21P24-201ENST00000413752 448 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 TOMM22P1-201ENST00000418578 312 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.77□□□□□ -1.81
NPAS1Q99742 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
NPAS1Q99742 AC002486.1-201ENST00000435098 391 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.77□□□□□ -1.81
NPAS1Q99742 AC006011.1-201ENST00000442758 349 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 RPL21P89-201ENST00000444021 467 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 AC079448.1-201ENST00000449377 373 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 snoU13.4-201ENST00000458916 104 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 snoU13.24-201ENST00000458998 104 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
NPAS1Q99742 RPS27AP13-201ENST00000498403 237 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
NPAS1Q99742 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.77□□□□□ -1.81
NPAS1Q99742 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.77□□□□□ -1.81
NPAS1Q99742 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.77□□□□□ -1.81
NPAS1Q99742 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC3.77□□□□□ -1.81
NPAS1Q99742 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.77□□□□□ -1.81
NPAS1Q99742 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.77□□□□□ -1.81
NPAS1Q99742 AC008489.1-201ENST00000524271 483 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.77□□□□□ -1.81
NPAS1Q99742 RPL21P12-201ENST00000559810 515 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 BNIP3P5-201ENST00000562290 498 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.77□□□□□ -1.81
NPAS1Q99742 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.77□□□□□ -1.81
NPAS1Q99742 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.77□□□□□ -1.81
NPAS1Q99742 AC107304.1-201ENST00000604229 296 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 Z84480.1-201ENST00000605131 311 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 AC004067.1-201ENST00000608733 700 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 AL592295.2-201ENST00000612578 206 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 MIR7151-201ENST00000617477 60 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 AC136475.10-201ENST00000620253 385 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.77□□□□□ -1.81
NPAS1Q99742 C2orf27A-204ENST00000623058 969 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.77□□□□□ -1.81
NPAS1Q99742 AC138649.5-201ENST00000637456 137 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
NPAS1Q99742 ZNF962P-201ENST00000443465 3140 ntBASIC3.77□□□□□ -1.81
NPAS1Q99742 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NPAS1Q99742 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.77□□□□□ -1.81
NPAS1Q99742 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NPAS1Q99742 AP001350.1-201ENST00000601906 1524 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.76□□□□□ -1.81
NPAS1Q99742 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
NPAS1Q99742 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NPAS1Q99742 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NPAS1Q99742 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NPAS1Q99742 AC007685.1-201ENST00000329806 452 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.76□□□□□ -1.81
NPAS1Q99742 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NPAS1Q99742 RNU6-181P-201ENST00000363225 107 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 RNU5E-8P-201ENST00000363502 116 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 UBE2V1P10-201ENST00000414685 269 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.76□□□□□ -1.81
NPAS1Q99742 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.76□□□□□ -1.81
NPAS1Q99742 RBMY1KP-201ENST00000423480 476 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 RPL21P66-201ENST00000426566 466 ntBASIC3.76□□□□□ -1.81
NPAS1Q99742 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.76□□□□□ -1.81
NPAS1Q99742 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms