Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 AC239860.2-201ENST00000525886 270 ntBASIC1.98□□□□□ -2.09
PCDH15Q96QU1 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.98□□□□□ -2.09
PCDH15Q96QU1 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PCDH15Q96QU1 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC1.98□□□□□ -2.09
PCDH15Q96QU1 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.98□□□□□ -2.09
PCDH15Q96QU1 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
PCDH15Q96QU1 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.98□□□□□ -2.09
PCDH15Q96QU1 AL160237.3-201ENST00000604114 1013 ntBASIC1.98□□□□□ -2.09
PCDH15Q96QU1 AL157700.1-201ENST00000561973 1432 ntBASIC1.98□□□□□ -2.09
PCDH15Q96QU1 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PCDH15Q96QU1 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
PCDH15Q96QU1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
PCDH15Q96QU1 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.98□□□□□ -2.09
PCDH15Q96QU1 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC1.98□□□□□ -2.09
PCDH15Q96QU1 AC008173.1-201ENST00000418901 264 ntBASIC1.98□□□□□ -2.09
PCDH15Q96QU1 AC244453.4-201ENST00000419150 388 ntBASIC1.98□□□□□ -2.09
PCDH15Q96QU1 MTCO3P4-201ENST00000419236 787 ntBASIC1.98□□□□□ -2.09
PCDH15Q96QU1 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.98□□□□□ -2.09
PCDH15Q96QU1 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC1.98□□□□□ -2.09
PCDH15Q96QU1 AL031663.1-201ENST00000437445 219 ntBASIC1.98□□□□□ -2.09
PCDH15Q96QU1 FABP5P3-201ENST00000437960 408 ntBASIC1.98□□□□□ -2.09
PCDH15Q96QU1 RPS7P5-201ENST00000441482 581 ntBASIC1.98□□□□□ -2.09
PCDH15Q96QU1 TBCAP3-201ENST00000512475 312 ntBASIC1.98□□□□□ -2.09
PCDH15Q96QU1 CENPUP2-201ENST00000555897 1186 ntBASIC1.98□□□□□ -2.09
PCDH15Q96QU1 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.98□□□□□ -2.09
PCDH15Q96QU1 AC115085.1-201ENST00000588924 229 ntBASIC1.98□□□□□ -2.09
PCDH15Q96QU1 AC244517.1-201ENST00000606030 2086 ntBASIC1.98□□□□□ -2.09
PCDH15Q96QU1 AC120053.1-201ENST00000607706 736 ntBASIC1.98□□□□□ -2.09
PCDH15Q96QU1 AC090617.7-201ENST00000623952 126 ntBASIC1.98□□□□□ -2.09
PCDH15Q96QU1 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
PCDH15Q96QU1 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
PCDH15Q96QU1 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
PCDH15Q96QU1 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
PCDH15Q96QU1 MIR421-201ENST00000365696 85 ntBASIC1.97□□□□□ -2.09
PCDH15Q96QU1 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.97□□□□□ -2.09
PCDH15Q96QU1 RNU6-629P-201ENST00000384061 103 ntBASIC1.97□□□□□ -2.09
PCDH15Q96QU1 RNU6-185P-201ENST00000384421 107 ntBASIC1.97□□□□□ -2.09
PCDH15Q96QU1 MIR9-3-201ENST00000385084 90 ntBASIC1.97□□□□□ -2.09
PCDH15Q96QU1 RNA5SP492-201ENST00000411330 114 ntBASIC1.97□□□□□ -2.09
PCDH15Q96QU1 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.97□□□□□ -2.09
PCDH15Q96QU1 FO393419.3-201ENST00000428741 282 ntBASIC1.97□□□□□ -2.09
PCDH15Q96QU1 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.97□□□□□ -2.09
PCDH15Q96QU1 AC073901.1-201ENST00000462471 408 ntBASIC1.97□□□□□ -2.09
PCDH15Q96QU1 RN7SKP234-201ENST00000517173 224 ntBASIC1.97□□□□□ -2.09
PCDH15Q96QU1 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.97□□□□□ -2.09
PCDH15Q96QU1 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.97□□□□□ -2.09
PCDH15Q96QU1 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.97□□□□□ -2.09
PCDH15Q96QU1 AC090425.2-201ENST00000608818 501 ntBASIC1.97□□□□□ -2.09
PCDH15Q96QU1 AC091046.2-201ENST00000620775 665 ntBASIC1.97□□□□□ -2.09
PCDH15Q96QU1 AC010680.1-201ENST00000590024 3590 ntBASIC1.97□□□□□ -2.09
PCDH15Q96QU1 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
PCDH15Q96QU1 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.96□□□□□ -2.1
PCDH15Q96QU1 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PCDH15Q96QU1 RNU6-77P-201ENST00000410554 91 ntBASIC1.96□□□□□ -2.1
PCDH15Q96QU1 AC109780.2-201ENST00000413467 845 ntBASIC1.96□□□□□ -2.1
PCDH15Q96QU1 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.96□□□□□ -2.1
PCDH15Q96QU1 LUZP4P1-201ENST00000415420 344 ntBASIC1.96□□□□□ -2.1
PCDH15Q96QU1 AC005005.2-201ENST00000420779 380 ntBASIC1.96□□□□□ -2.1
PCDH15Q96QU1 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.96□□□□□ -2.1
PCDH15Q96QU1 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.96□□□□□ -2.1
PCDH15Q96QU1 HMGN2P20-201ENST00000437531 273 ntBASIC1.96□□□□□ -2.1
PCDH15Q96QU1 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.96□□□□□ -2.1
PCDH15Q96QU1 CBWD4P-201ENST00000445695 655 ntBASIC1.96□□□□□ -2.1
PCDH15Q96QU1 AL034418.1-201ENST00000448675 860 ntBASIC1.96□□□□□ -2.1
PCDH15Q96QU1 FABP5P13-201ENST00000452144 328 ntBASIC1.96□□□□□ -2.1
PCDH15Q96QU1 AIG1P1-201ENST00000503376 148 ntBASIC1.96□□□□□ -2.1
PCDH15Q96QU1 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.96□□□□□ -2.1
PCDH15Q96QU1 AC104115.2-201ENST00000523026 687 ntBASIC1.96□□□□□ -2.1
PCDH15Q96QU1 TRAV11-201ENST00000539512 339 ntBASIC1.96□□□□□ -2.1
PCDH15Q96QU1 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.96□□□□□ -2.1
PCDH15Q96QU1 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.96□□□□□ -2.1
PCDH15Q96QU1 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC1.96□□□□□ -2.1
PCDH15Q96QU1 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.96□□□□□ -2.1
PCDH15Q96QU1 snoU13.31-201ENST00000607291 104 ntBASIC1.96□□□□□ -2.1
PCDH15Q96QU1 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.96□□□□□ -2.1
PCDH15Q96QU1 AP001350.1-201ENST00000601906 1524 ntBASIC1.96□□□□□ -2.1
PCDH15Q96QU1 MTND4P34-201ENST00000572715 1371 ntBASIC1.96□□□□□ -2.1
PCDH15Q96QU1 RNU6-457P-201ENST00000363999 107 ntBASIC1.96□□□□□ -2.1
PCDH15Q96QU1 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.96□□□□□ -2.1
PCDH15Q96QU1 AC234782.4-201ENST00000417646 1048 ntBASIC1.96□□□□□ -2.1
PCDH15Q96QU1 AL445685.2-201ENST00000422551 342 ntBASIC1.96□□□□□ -2.1
PCDH15Q96QU1 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.96□□□□□ -2.1
PCDH15Q96QU1 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.96□□□□□ -2.1
PCDH15Q96QU1 RPL7P29-201ENST00000437151 728 ntBASIC1.96□□□□□ -2.1
PCDH15Q96QU1 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
PCDH15Q96QU1 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC1.96□□□□□ -2.1
PCDH15Q96QU1 AC067805.1-201ENST00000559344 470 ntBASIC1.96□□□□□ -2.1
PCDH15Q96QU1 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
PCDH15Q96QU1 AC073569.3-201ENST00000619055 682 ntBASIC1.96□□□□□ -2.1
PCDH15Q96QU1 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
PCDH15Q96QU1 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.96□□□□□ -2.1
PCDH15Q96QU1 ZNF271P-202ENST00000465539 1970 ntBASIC1.95□□□□□ -2.1
PCDH15Q96QU1 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.95□□□□□ -2.1
PCDH15Q96QU1 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
PCDH15Q96QU1 RNU6ATAC16P-201ENST00000408591 138 ntBASIC1.95□□□□□ -2.1
PCDH15Q96QU1 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.95□□□□□ -2.1
PCDH15Q96QU1 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
PCDH15Q96QU1 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC1.95□□□□□ -2.1
PCDH15Q96QU1 AC092685.1-201ENST00000447960 1243 ntBASIC1.95□□□□□ -2.1
PCDH15Q96QU1 AL513343.1-201ENST00000451818 792 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms