Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
CNTNAP3BQ96NU0 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
CNTNAP3BQ96NU0 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CNTNAP3BQ96NU0 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CNTNAP3BQ96NU0 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CNTNAP3BQ96NU0 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 Z75746.1-201ENST00000440243 2080 ntBASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 Y_RNA.261-201ENST00000364631 102 ntBASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 RNU1-59P-201ENST00000364829 162 ntBASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 Y_RNA.292-201ENST00000364904 97 ntBASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 RNU6-1325P-201ENST00000364905 105 ntBASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 SNORA69.1-201ENST00000390904 137 ntBASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 Y_RNA.580-201ENST00000391004 95 ntBASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 Y_RNA.592-201ENST00000410274 109 ntBASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 MTND3P9-201ENST00000429526 346 ntBASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 RANP2-201ENST00000456833 229 ntBASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 SNORD116-28-201ENST00000516123 91 ntBASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 RNU2-31P-201ENST00000516954 155 ntBASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 AC109479.2-201ENST00000517842 174 ntBASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 AC010186.2-204ENST00000537668 439 ntBASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 AC112693.2-201ENST00000556538 232 ntBASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 HMGN2P47-201ENST00000559378 272 ntBASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 AC007494.1-201ENST00000562293 760 ntBASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 U1.25-201ENST00000614085 162 ntBASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 IRF5P1-201ENST00000504852 2164 ntBASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 AC140134.1-201ENST00000511830 3544 ntBASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 AC009229.4-201ENST00000623854 1947 ntBASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 PRO1804-201ENST00000623780 2050 ntBASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.54□□□□□ -1.52
CNTNAP3BQ96NU0 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 CASC19-228ENST00000641414 1684 ntBASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 OR4G2P-202ENST00000641004 1759 ntBASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 Y_RNA.27-201ENST00000362540 103 ntBASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 RNU6-1035P-201ENST00000384477 107 ntBASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 DBIP1-201ENST00000401435 260 ntBASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 RPL31P2-201ENST00000413849 377 ntBASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 AL133173.1-201ENST00000423458 397 ntBASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 AC093106.2-201ENST00000428212 385 ntBASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 AC127537.2-201ENST00000439258 465 ntBASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 AC010733.1-201ENST00000451515 401 ntBASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 RN7SL591P-201ENST00000496150 292 ntBASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 RNA5SP400-201ENST00000517155 111 ntBASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 AC027288.2-201ENST00000553028 243 ntBASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 AC025588.3-201ENST00000604182 274 ntBASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 MTND1P7-201ENST00000632801 297 ntBASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CNTNAP3BQ96NU0 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms