Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AL353748.2-201ENST00000622148 471 ntBASIC2.4□□□□□ -2.03
CCDC42Q96M95 AC079597.1-201ENST00000624306 508 ntBASIC2.4□□□□□ -2.03
CCDC42Q96M95 MIR203B-201ENST00000636080 86 ntBASIC2.4□□□□□ -2.03
CCDC42Q96M95 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC42Q96M95 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.4□□□□□ -2.03
CCDC42Q96M95 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CCDC42Q96M95 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC42Q96M95 Z99496.1-201ENST00000469424 1477 ntBASIC2.39□□□□□ -2.03
CCDC42Q96M95 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC42Q96M95 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC42Q96M95 AC010680.1-201ENST00000590024 3590 ntBASIC2.39□□□□□ -2.03
CCDC42Q96M95 AC008669.1-201ENST00000565823 2178 ntBASIC2.39□□□□□ -2.03
CCDC42Q96M95 SET-203ENST00000372688 801 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC42Q96M95 SNORA67.4-201ENST00000384688 142 ntBASIC2.39□□□□□ -2.03
CCDC42Q96M95 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC42Q96M95 AC107081.1-201ENST00000414975 361 ntBASIC2.39□□□□□ -2.03
CCDC42Q96M95 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.39□□□□□ -2.03
CCDC42Q96M95 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC42Q96M95 AL031659.1-201ENST00000447075 539 ntBASIC2.39□□□□□ -2.03
CCDC42Q96M95 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC42Q96M95 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.39□□□□□ -2.03
CCDC42Q96M95 NAP1L1P3-201ENST00000462291 880 ntBASIC2.39□□□□□ -2.03
CCDC42Q96M95 RPS27P23-201ENST00000487608 251 ntBASIC2.39□□□□□ -2.03
CCDC42Q96M95 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC42Q96M95 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC42Q96M95 RNU4-29P-201ENST00000515943 174 ntBASIC2.39□□□□□ -2.03
CCDC42Q96M95 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC42Q96M95 MIR3609-201ENST00000582661 80 ntBASIC2.39□□□□□ -2.03
CCDC42Q96M95 AC022069.1-201ENST00000582910 658 ntBASIC2.39□□□□□ -2.03
CCDC42Q96M95 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.39□□□□□ -2.03
CCDC42Q96M95 AL137246.1-201ENST00000607072 977 ntBASIC2.39□□□□□ -2.03
CCDC42Q96M95 AC068722.2-201ENST00000618734 544 ntBASIC2.39□□□□□ -2.03
CCDC42Q96M95 AC009831.4-201ENST00000620744 325 ntBASIC2.39□□□□□ -2.03
CCDC42Q96M95 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC42Q96M95 AC008432.1-201ENST00000615912 1320 ntBASIC2.39□□□□□ -2.03
CCDC42Q96M95 ENSAP3-201ENST00000312710 333 ntBASIC2.38□□□□□ -2.03
CCDC42Q96M95 RNU2-17P-201ENST00000410290 190 ntBASIC2.38□□□□□ -2.03
CCDC42Q96M95 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC42Q96M95 WARS2P1-201ENST00000429678 537 ntBASIC2.38□□□□□ -2.03
CCDC42Q96M95 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC42Q96M95 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC42Q96M95 AC109486.1-201ENST00000486833 374 ntBASIC2.38□□□□□ -2.03
CCDC42Q96M95 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC42Q96M95 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC42Q96M95 OR8K4P-201ENST00000534608 872 ntBASIC2.38□□□□□ -2.03
CCDC42Q96M95 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.38□□□□□ -2.03
CCDC42Q96M95 EIF4BP1-201ENST00000554881 351 ntBASIC2.38□□□□□ -2.03
CCDC42Q96M95 AC027176.1-201ENST00000560204 514 ntBASIC2.38□□□□□ -2.03
CCDC42Q96M95 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC42Q96M95 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC42Q96M95 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC42Q96M95 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC42Q96M95 AC005000.2-201ENST00000605468 310 ntBASIC2.38□□□□□ -2.03
CCDC42Q96M95 AL121917.1-203ENST00000605534 577 ntBASIC2.38□□□□□ -2.03
CCDC42Q96M95 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC42Q96M95 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.38□□□□□ -2.03
CCDC42Q96M95 AC107294.1-201ENST00000609524 467 ntBASIC2.38□□□□□ -2.03
CCDC42Q96M95 AC034102.8-201ENST00000615146 484 ntBASIC2.38□□□□□ -2.03
CCDC42Q96M95 AC025016.1-201ENST00000616746 682 ntBASIC2.38□□□□□ -2.03
CCDC42Q96M95 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC42Q96M95 AC083865.1-201ENST00000636634 831 ntBASIC2.38□□□□□ -2.03
CCDC42Q96M95 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC42Q96M95 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC42Q96M95 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
CCDC42Q96M95 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC42Q96M95 MTND5P31-201ENST00000419366 1374 ntBASIC2.37□□□□□ -2.03
CCDC42Q96M95 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC42Q96M95 AL365361.1-201ENST00000566942 3481 ntBASIC2.37□□□□□ -2.03
CCDC42Q96M95 RNU6-1339P-201ENST00000363574 91 ntBASIC2.37□□□□□ -2.03
CCDC42Q96M95 Y_RNA.333-201ENST00000365274 102 ntBASIC2.37□□□□□ -2.03
CCDC42Q96M95 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC42Q96M95 EZH2P1-201ENST00000431167 291 ntBASIC2.37□□□□□ -2.03
CCDC42Q96M95 MTCO1P57-201ENST00000432182 261 ntBASIC2.37□□□□□ -2.03
CCDC42Q96M95 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC42Q96M95 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC42Q96M95 MTND2P21-201ENST00000436242 1042 ntBASIC2.37□□□□□ -2.03
CCDC42Q96M95 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.37□□□□□ -2.03
CCDC42Q96M95 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC42Q96M95 PGBD4P3-201ENST00000440731 581 ntBASIC2.37□□□□□ -2.03
CCDC42Q96M95 RPL23AP70-201ENST00000483361 460 ntBASIC2.37□□□□□ -2.03
CCDC42Q96M95 AC090096.1-201ENST00000489168 390 ntBASIC2.37□□□□□ -2.03
CCDC42Q96M95 AC090255.1-201ENST00000495779 349 ntBASIC2.37□□□□□ -2.03
CCDC42Q96M95 AC114322.1-201ENST00000506771 926 ntBASIC2.37□□□□□ -2.03
CCDC42Q96M95 OR5BM1P-201ENST00000512021 366 ntBASIC2.37□□□□□ -2.03
CCDC42Q96M95 AC008676.3-201ENST00000521237 435 ntBASIC2.37□□□□□ -2.03
CCDC42Q96M95 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.37□□□□□ -2.03
CCDC42Q96M95 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.37□□□□□ -2.03
CCDC42Q96M95 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.37□□□□□ -2.03
CCDC42Q96M95 AC234778.2-201ENST00000566241 354 ntBASIC2.37□□□□□ -2.03
CCDC42Q96M95 LRRC37A5P-203ENST00000580181 585 ntBASIC2.37□□□□□ -2.03
CCDC42Q96M95 AC090616.3-201ENST00000582184 217 ntBASIC2.37□□□□□ -2.03
CCDC42Q96M95 AC012669.1-201ENST00000603209 283 ntBASIC2.37□□□□□ -2.03
CCDC42Q96M95 CR589904.2-201ENST00000612533 440 ntBASIC2.37□□□□□ -2.03
CCDC42Q96M95 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC42Q96M95 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC42Q96M95 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.37□□□□□ -2.03
CCDC42Q96M95 CTSLP2-204ENST00000629029 392 ntBASIC2.37□□□□□ -2.03
CCDC42Q96M95 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC42Q96M95 MTCO1P6-201ENST00000481192 1384 ntBASIC2.36□□□□□ -2.03
CCDC42Q96M95 AC111188.2-201ENST00000529697 1387 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms