Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC018690.1-201ENST00000608144 626 ntBASIC1.52□□□□□ -2.17
SPG11Q96JI7 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.52□□□□□ -2.17
SPG11Q96JI7 CDC27P3-201ENST00000635418 1910 ntBASIC1.52□□□□□ -2.17
SPG11Q96JI7 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.52□□□□□ -2.17
SPG11Q96JI7 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SPG11Q96JI7 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.51□□□□□ -2.17
SPG11Q96JI7 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC1.51□□□□□ -2.17
SPG11Q96JI7 AC096992.1-201ENST00000459808 709 ntBASIC1.51□□□□□ -2.17
SPG11Q96JI7 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC1.51□□□□□ -2.17
SPG11Q96JI7 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC1.51□□□□□ -2.17
SPG11Q96JI7 FABP5P5-201ENST00000515537 406 ntBASIC1.51□□□□□ -2.17
SPG11Q96JI7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
SPG11Q96JI7 SNORD53B-201ENST00000577887 78 ntBASIC1.51□□□□□ -2.17
SPG11Q96JI7 MAGOH2P-202ENST00000584384 429 ntBASIC1.51□□□□□ -2.17
SPG11Q96JI7 AC006254.3-201ENST00000603353 884 ntBASIC1.51□□□□□ -2.17
SPG11Q96JI7 AC243773.3-201ENST00000613270 256 ntBASIC1.51□□□□□ -2.17
SPG11Q96JI7 AC121761.2-201ENST00000617300 689 ntBASIC1.51□□□□□ -2.17
SPG11Q96JI7 MIR6086-201ENST00000638065 55 ntBASIC1.51□□□□□ -2.17
SPG11Q96JI7 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
SPG11Q96JI7 AC116158.1-201ENST00000560231 2129 ntBASIC1.51□□□□□ -2.17
SPG11Q96JI7 Y_RNA.115-201ENST00000363272 98 ntBASIC1.51□□□□□ -2.17
SPG11Q96JI7 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.51□□□□□ -2.17
SPG11Q96JI7 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC1.51□□□□□ -2.17
SPG11Q96JI7 AL139109.1-201ENST00000455491 297 ntBASIC1.51□□□□□ -2.17
SPG11Q96JI7 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC1.51□□□□□ -2.17
SPG11Q96JI7 AC104581.2-201ENST00000572227 430 ntBASIC1.51□□□□□ -2.17
SPG11Q96JI7 AC060766.3-201ENST00000591442 263 ntBASIC1.51□□□□□ -2.17
SPG11Q96JI7 AP000787.2-201ENST00000604432 568 ntBASIC1.51□□□□□ -2.17
SPG11Q96JI7 AL133216.2-202ENST00000634512 349 ntBASIC1.51□□□□□ -2.17
SPG11Q96JI7 MTND4P1-201ENST00000457501 1466 ntBASIC1.51□□□□□ -2.17
SPG11Q96JI7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.5□□□□□ -2.17
SPG11Q96JI7 SET-203ENST00000372688 801 ntTSL 2 BASIC1.5□□□□□ -2.17
SPG11Q96JI7 TAS2R15P-201ENST00000390674 928 ntBASIC1.5□□□□□ -2.17
SPG11Q96JI7 AL121972.1-201ENST00000402023 252 ntBASIC1.5□□□□□ -2.17
SPG11Q96JI7 DHFRP5-201ENST00000406944 564 ntBASIC1.5□□□□□ -2.17
SPG11Q96JI7 RNA5SP344-201ENST00000411081 104 ntBASIC1.5□□□□□ -2.17
SPG11Q96JI7 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.5□□□□□ -2.17
SPG11Q96JI7 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC1.5□□□□□ -2.17
SPG11Q96JI7 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.5□□□□□ -2.17
SPG11Q96JI7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC1.5□□□□□ -2.17
SPG11Q96JI7 RPL23AP20-201ENST00000447965 421 ntBASIC1.5□□□□□ -2.17
SPG11Q96JI7 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC1.5□□□□□ -2.17
SPG11Q96JI7 SNORA25.15-201ENST00000516487 89 ntBASIC1.5□□□□□ -2.17
SPG11Q96JI7 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC1.5□□□□□ -2.17
SPG11Q96JI7 COX6CP5-201ENST00000527162 228 ntBASIC1.5□□□□□ -2.17
SPG11Q96JI7 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC1.5□□□□□ -2.17
SPG11Q96JI7 AC105429.2-201ENST00000610567 517 ntBASIC1.5□□□□□ -2.17
SPG11Q96JI7 AL157834.3-201ENST00000615543 103 ntBASIC1.5□□□□□ -2.17
SPG11Q96JI7 AC092881.1-201ENST00000638218 2733 ntBASIC1.5□□□□□ -2.17
SPG11Q96JI7 NUP58P1-201ENST00000502546 1738 ntBASIC1.5□□□□□ -2.17
SPG11Q96JI7 SRIP3-201ENST00000413200 219 ntBASIC1.5□□□□□ -2.17
SPG11Q96JI7 AL096701.2-201ENST00000416920 238 ntBASIC1.5□□□□□ -2.17
SPG11Q96JI7 RFC5P1-201ENST00000454419 874 ntBASIC1.5□□□□□ -2.17
SPG11Q96JI7 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.5□□□□□ -2.17
SPG11Q96JI7 AC034222.1-201ENST00000494052 532 ntBASIC1.5□□□□□ -2.17
SPG11Q96JI7 AC006390.1-201ENST00000508068 283 ntBASIC1.5□□□□□ -2.17
SPG11Q96JI7 AC114786.4-201ENST00000508771 728 ntBASIC1.5□□□□□ -2.17
SPG11Q96JI7 AC114797.1-201ENST00000514003 728 ntBASIC1.5□□□□□ -2.17
SPG11Q96JI7 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.5□□□□□ -2.17
SPG11Q96JI7 MIR1273G-201ENST00000577677 100 ntBASIC1.5□□□□□ -2.17
SPG11Q96JI7 AC010678.1-201ENST00000614118 713 ntBASIC1.5□□□□□ -2.17
SPG11Q96JI7 AC073348.1-201ENST00000623002 331 ntBASIC1.5□□□□□ -2.17
SPG11Q96JI7 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC1.5□□□□□ -2.17
SPG11Q96JI7 PNPT1P2-201ENST00000456768 2050 ntBASIC1.5□□□□□ -2.17
SPG11Q96JI7 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
SPG11Q96JI7 ZNF720P1-201ENST00000562403 1939 ntBASIC1.49□□□□□ -2.17
SPG11Q96JI7 SNORA26.7-201ENST00000391288 122 ntBASIC1.49□□□□□ -2.17
SPG11Q96JI7 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC1.49□□□□□ -2.17
SPG11Q96JI7 AC129850.1-201ENST00000436203 508 ntBASIC1.49□□□□□ -2.17
SPG11Q96JI7 RPL23AP35-201ENST00000451906 501 ntBASIC1.49□□□□□ -2.17
SPG11Q96JI7 TMEM248P1-201ENST00000510579 951 ntBASIC1.49□□□□□ -2.17
SPG11Q96JI7 CR383656.8-201ENST00000549046 145 ntBASIC1.49□□□□□ -2.17
SPG11Q96JI7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.49□□□□□ -2.17
SPG11Q96JI7 BX649567.1-201ENST00000642071 1134 ntBASIC1.49□□□□□ -2.17
SPG11Q96JI7 AC066616.2-201ENST00000559334 1481 ntBASIC1.49□□□□□ -2.17
SPG11Q96JI7 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SPG11Q96JI7 RNA5SP160-201ENST00000364866 120 ntBASIC1.49□□□□□ -2.17
SPG11Q96JI7 AL627390.1-201ENST00000396055 340 ntBASIC1.49□□□□□ -2.17
SPG11Q96JI7 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
SPG11Q96JI7 AP000852.1-201ENST00000472460 573 ntBASIC1.49□□□□□ -2.17
SPG11Q96JI7 GZMAP1-201ENST00000503054 631 ntBASIC1.49□□□□□ -2.17
SPG11Q96JI7 DNAJC8P1-201ENST00000554535 372 ntBASIC1.49□□□□□ -2.17
SPG11Q96JI7 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.49□□□□□ -2.17
SPG11Q96JI7 AC109446.2-201ENST00000567872 497 ntBASIC1.49□□□□□ -2.17
SPG11Q96JI7 AC013562.2-201ENST00000611632 603 ntBASIC1.49□□□□□ -2.17
SPG11Q96JI7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.49□□□□□ -2.17
SPG11Q96JI7 MIR6767-201ENST00000637302 66 ntBASIC1.49□□□□□ -2.17
SPG11Q96JI7 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC1.49□□□□□ -2.17
SPG11Q96JI7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SPG11Q96JI7 ZNF876P-202ENST00000398732 1485 ntBASIC1.49□□□□□ -2.17
SPG11Q96JI7 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SPG11Q96JI7 RNU6-35P-201ENST00000384530 107 ntBASIC1.48□□□□□ -2.17
SPG11Q96JI7 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC1.48□□□□□ -2.17
SPG11Q96JI7 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.48□□□□□ -2.17
SPG11Q96JI7 AC079804.2-201ENST00000490376 200 ntBASIC1.48□□□□□ -2.17
SPG11Q96JI7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SPG11Q96JI7 SNORA70.14-201ENST00000516205 110 ntBASIC1.48□□□□□ -2.17
SPG11Q96JI7 PTP4A1P6-201ENST00000531034 478 ntBASIC1.48□□□□□ -2.17
SPG11Q96JI7 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
SPG11Q96JI7 AL160237.3-201ENST00000604114 1013 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms