Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL445584.1-201ENST00000431451 330 ntBASIC4.69□□□□□ -1.66
CHMP4CQ96CF2 MTND1P34-201ENST00000438556 671 ntBASIC4.69□□□□□ -1.66
CHMP4CQ96CF2 RABEPKP1-201ENST00000440529 1026 ntBASIC4.69□□□□□ -1.66
CHMP4CQ96CF2 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.69□□□□□ -1.66
CHMP4CQ96CF2 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC4.69□□□□□ -1.66
CHMP4CQ96CF2 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC4.69□□□□□ -1.66
CHMP4CQ96CF2 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.69□□□□□ -1.66
CHMP4CQ96CF2 AC026801.2-201ENST00000515352 425 ntBASIC4.69□□□□□ -1.66
CHMP4CQ96CF2 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.69□□□□□ -1.66
CHMP4CQ96CF2 AP003122.4-201ENST00000530980 758 ntBASIC4.69□□□□□ -1.66
CHMP4CQ96CF2 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.69□□□□□ -1.66
CHMP4CQ96CF2 AL391156.1-201ENST00000554965 554 ntBASIC4.69□□□□□ -1.66
CHMP4CQ96CF2 COX6CP3-201ENST00000580869 223 ntBASIC4.69□□□□□ -1.66
CHMP4CQ96CF2 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.69□□□□□ -1.66
CHMP4CQ96CF2 AL136363.2-201ENST00000604173 851 ntBASIC4.69□□□□□ -1.66
CHMP4CQ96CF2 AL451086.1-201ENST00000605596 223 ntBASIC4.69□□□□□ -1.66
CHMP4CQ96CF2 AC004908.2-201ENST00000609090 574 ntBASIC4.69□□□□□ -1.66
CHMP4CQ96CF2 BX664608.1-201ENST00000610519 487 ntBASIC4.69□□□□□ -1.66
CHMP4CQ96CF2 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHMP4CQ96CF2 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.69□□□□□ -1.66
CHMP4CQ96CF2 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CHMP4CQ96CF2 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CHMP4CQ96CF2 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.69□□□□□ -1.66
CHMP4CQ96CF2 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 RNU6-1074P-201ENST00000383995 104 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 MIR30B-201ENST00000384850 88 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 RN7SKP202-201ENST00000410439 330 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 RNU6-516P-201ENST00000411381 104 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 GOT2P5-201ENST00000433995 546 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 ARPC3P1-201ENST00000437218 533 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 FTH1P1-201ENST00000437933 532 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 TPT1P14-201ENST00000448018 505 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 HMGB3P22-202ENST00000451823 572 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 RNU7-170P-201ENST00000459303 61 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 RPL21P11-201ENST00000461458 483 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 AC068305.1-201ENST00000497406 726 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 SNORA31.20-201ENST00000517111 133 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 MTCYBP41-201ENST00000528913 1123 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 AP003181.2-201ENST00000528941 181 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 AC022880.1-201ENST00000534017 973 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 AC012182.1-201ENST00000570133 895 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 AC068790.6-201ENST00000602558 258 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 AL592436.1-201ENST00000605135 558 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 AC098614.4-201ENST00000607601 462 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 AC072046.2-201ENST00000618366 268 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 FP236240.3-201ENST00000623061 327 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 AL359740.1-201ENST00000624340 592 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 PISRT1-201ENST00000626175 531 ntBASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CHMP4CQ96CF2 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 RNA5SP399-201ENST00000364003 117 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 RNU6-637P-201ENST00000384050 107 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 RNU6-629P-201ENST00000384061 103 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 RNU6-1181P-201ENST00000384191 106 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 MIR135A2-201ENST00000384854 100 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 RPL35AP22-201ENST00000436855 335 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 AC083863.1-201ENST00000438811 231 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 AL031667.1-201ENST00000440222 725 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 AL500522.2-201ENST00000448562 343 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 RPL7P23-201ENST00000493874 747 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 AC026726.1-201ENST00000512859 601 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 DUXAP2-201ENST00000519198 589 ntBASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CHMP4CQ96CF2 AL133271.1-201ENST00000538229 291 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms