Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 MTCO1P9-201ENST00000505577 1534 ntBASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM43Q96BQ3 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 RNU6-1078P-201ENST00000364522 103 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 RNA5SP51-201ENST00000364750 119 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 RN7SKP226-201ENST00000364912 300 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 Y_RNA.296-201ENST00000364930 108 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 Y_RNA.548-201ENST00000384656 105 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 LAP3P1-201ENST00000403648 294 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 RNU6-195P-201ENST00000411352 109 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AL137014.1-201ENST00000420490 1226 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AL158156.1-201ENST00000422509 473 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AC108751.2-201ENST00000469993 231 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AC055855.1-201ENST00000489563 579 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AC087883.1-201ENST00000551882 391 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AC027807.1-201ENST00000559921 996 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AC006960.3-201ENST00000561845 705 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AC136619.2-201ENST00000563361 631 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AC099489.2-201ENST00000574976 260 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 MIR5187-201ENST00000583479 76 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AC245014.2-201ENST00000603689 287 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AC246785.4-201ENST00000605374 287 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AL031666.3-201ENST00000609320 1006 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AL161734.1-201ENST00000609720 557 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 TUG1_1.1-201ENST00000610654 145 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AC090970.3-201ENST00000612566 866 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AC073534.2-201ENST00000620377 381 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AC012150.2-201ENST00000621300 544 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AC112204.3-201ENST00000623822 332 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AL159972.1-201ENST00000625150 448 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 AC055839.1-201ENST00000634467 498 ntBASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.29□□□□□ -1.72
TRIM43Q96BQ3 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 MIR490-201ENST00000384865 128 ntBASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 HMGN1P24-201ENST00000412282 298 ntBASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 USP9YP36-201ENST00000424581 829 ntBASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 AC097713.2-201ENST00000430199 356 ntBASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 RPS6P12-201ENST00000432491 726 ntBASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 AC119618.1-201ENST00000434191 222 ntBASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 DNAJC19P4-201ENST00000440115 345 ntBASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 RAC1P7-201ENST00000445367 377 ntBASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 AC234775.1-201ENST00000454247 670 ntBASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 MTCO3P20-201ENST00000454926 688 ntBASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 SNORD108-201ENST00000459332 71 ntBASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 RN7SKP18-201ENST00000516005 275 ntBASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 AC087369.1-201ENST00000520775 996 ntBASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 AC092794.1-201ENST00000612734 582 ntBASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 U6atac.1-201ENST00000616025 117 ntBASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 SEPT14P19-203ENST00000633205 211 ntBASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.28□□□□□ -1.72
TRIM43Q96BQ3 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.27□□□□□ -1.73
TRIM43Q96BQ3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms