Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 RNU1-75P-201ENST00000347264 129 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 SNORA14A-201ENST00000364773 135 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 RPS7P13-201ENST00000413955 498 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 MTND1P20-201ENST00000430341 950 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 TPT1P14-201ENST00000448018 505 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 ATG12P2-201ENST00000456830 416 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 RPS27P29-201ENST00000463110 252 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 AL049874.1-201ENST00000489560 388 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 KCTD9P5-201ENST00000504141 1170 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 LTV1P1-201ENST00000510683 1237 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 RNU6-840P-201ENST00000517275 65 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 CASP1P1-201ENST00000526345 212 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 MTATP6P15-201ENST00000527233 835 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 AC013828.2-201ENST00000532487 235 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 AL133271.1-201ENST00000538229 291 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 TRAV37-201ENST00000553906 342 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 AC009094.1-201ENST00000564443 426 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 MIR3609-201ENST00000582661 80 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 HSPE1P7-201ENST00000604681 321 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 TUG1_2.1-201ENST00000614234 87 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 AC083809.1-201ENST00000615051 472 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.39□□□□□ -1.87
VPS33AQ96AX1 AL513302.2-201ENST00000562313 1842 ntBASIC3.39□□□□□ -1.87
VPS33AQ96AX1 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 AC006378.2-201ENST00000623178 2476 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 GABRG2-229ENST00000641017 3628 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 OR4G2P-202ENST00000641004 1759 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 RNY4P24-201ENST00000362735 96 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 RNU6-805P-201ENST00000365643 106 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 ATP5F1P3-201ENST00000397213 657 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 HSFY6P-201ENST00000445573 403 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 AC009220.1-201ENST00000451614 275 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 MTND2P24-201ENST00000453434 806 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 AL133162.1-201ENST00000463228 453 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 VN1R105P-201ENST00000486595 910 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 AP000563.1-201ENST00000490865 758 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 CEACAMP10-202ENST00000495431 496 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 AC135721.1-201ENST00000497954 479 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 AC006445.2-201ENST00000510061 472 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 MTCO1P35-201ENST00000515270 228 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 RNU6-678P-201ENST00000516832 109 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 AC004024.1-201ENST00000549244 247 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 CCNG2P1-201ENST00000549521 1000 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 AL355836.1-201ENST00000555951 870 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 OR4H12P-201ENST00000556269 907 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 MIR4700-201ENST00000578311 74 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 AP001004.1-201ENST00000582468 324 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 MIR5187-201ENST00000583479 76 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 AC013553.2-201ENST00000604244 589 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 AC091965.5-201ENST00000624785 342 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 MTND5P27-201ENST00000428871 1720 ntBASIC3.38□□□□□ -1.87
VPS33AQ96AX1 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
VPS33AQ96AX1 AC103988.1-201ENST00000566382 2177 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms